RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Pdia5Q921X9 517 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Mat2bQ99LB6 334 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Slc7a5Q9Z127 512 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Ptdss2Q9Z1X2 473 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Zscan4bE9Q3G0 505 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Slc28a2O88627 660 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Ruvbl1P60122 456 aaKnown RBP13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Gpr165Q3V3A3 455 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Tas2r106Q7M724 308 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Cnksr3Q8BMA3 555 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Sdhaf3Q8BQU3 125 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Ak5Q920P5 562 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Dnase1l1Q9D7J6 314 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Lrrc34Q9DAM1 415 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Hspb3Q9QZ57 154 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 UxtQ9WTZ0 157 aa13.78□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Zfp809G3X9G7 402 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Rbm15Q0VBL3 962 aaKnown RBP13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Trmt6Q8CE96 497 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Gspt1Q8R050 636 aaKnown RBP13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Vmn1r219Q8R271 312 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Rsph14Q9D3W1 341 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Spaca1Q9DA48 305 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Fabp12Q9DAK4 132 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Fundc1Q9DB70 155 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Nek7Q9ES74 302 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Lmx1aQ9JKU8 382 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Chd2E9PZM4 1827 aaKnown RBP13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Faap100A2ACJ2 879 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 4930402K13RikB1AW18 415 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 MtpnP62774 118 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 FaddQ61160 205 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Eif2dQ61211 570 aaKnown RBP13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Tmem198Q8BG75 360 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Bnc2Q8BMQ3 1127 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Olfr1276Q8VF40 312 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Olfr1346Q8VGH6 313 aa13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 PollQ9QXE2 573 aaKnown RBP13.77□□□□□ -0.2
Col1a1-201ENSMUST00000001547 Inpp5aE9QAS7 422 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Gm10722F6VLK5 217 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 GnazO70443 355 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Gjb3P28231 270 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Dppa5bP85965 119 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Alg11Q3TZM9 492 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Slc25a51Q5HZI9 298 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Slc10a7Q5PT53 340 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 MertkQ60805 994 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Arfrp1Q8BXL7 201 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Lmo3Q8BZL8 145 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Panx3Q8CEG0 392 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 St8sia6Q8K4T1 398 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 AslQ91YI0 464 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Q99KU6 348 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Atp6ap1lD3Z5W0 336 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Csf2P01587 141 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 OcmP51879 109 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Nudt1P53368 156 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Vat1Q62465 406 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 GkQ64516 559 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Rcor1Q8CFE3 480 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 C1raQ8CG16 707 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Ankle1A8VU90 534 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Serpinb9eO08806 377 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Nrp2O35375 931 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Ripk1Q60855 656 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Dnajc15Q78YY6 149 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Zfp940Q8R2Q3 566 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Olfr1508Q9R0K4 310 aa13.77□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Smim17A0A504 109 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Aif1O70200 147 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Shox2P70390 331 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Zfp935Q14DI0 353 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 B3gntl1Q3U129 357 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Uimc1Q5U5Q9 727 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Six3Q62233 333 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Angptl1Q640P2 490 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Olfr667Q7TRP4 326 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Pum1Q80U78 1189 aaKnown RBP13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Ap4e1Q80V94 1122 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Ap3s2Q8BSZ2 193 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Bbs4Q8C1Z7 520 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Mbtps2Q8CHX6 515 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 GneQ91WG8 722 aaKnown RBP13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Zdhhc6Q9CPV7 413 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 PglsQ9CQ60 257 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Trim2Q9ESN6 744 aaKnown RBP13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Gm42372A0A1B0GT27 204 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Slc6a6O35316 621 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Art5P70352 309 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Arhgap20Q6IFT4 1182 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Cst9Q9Z0H6 137 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Cldn9Q9Z0S7 217 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 H2-BlV9GXR0 257 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Als2Q920R0 1651 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Gm8126E9Q1N7 198 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Gm10721J3QPJ9 223 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 CntfP51642 198 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 GstcdQ5RL51 634 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Ptx4Q6RUU0 478 aa13.76□□□□□ -0.21
Col1a1-201ENSMUST00000001547 Olfr1105Q7TR58 312 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms