RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PATE1Q8WXA2 126 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CCDC74AQ96AQ1 378 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SH3KBP1Q96B97 665 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CCDC3Q9BQI4 270 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CCM2Q9BSQ5 444 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 FAM167BQ9BTA0 163 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CCDC106Q9BWC9 280 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CADM1Q9BY67 442 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ABCG4Q9H172 646 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SARS2Q9NP81 518 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 MARCOQ9UEW3 520 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TLK1Q9UKI8 766 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SLC39A10Q9ULF5 831 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PRSS21Q9Y6M0 314 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 RNF215Q9Y6U7 377 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TPRP12270 2363 aaKnown RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 TARM1B6A8C7 271 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 GSC2O15499 205 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 TRIM13O60858 407 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 F7P08709 466 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 SBK3P0C264 359 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 SLC35E2BP0CK96 405 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 KITP10721 976 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 ESRRAP11474 423 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 RPS3P23396 243 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 RPL10P27635 214 aaKnown RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 CRABP2P29373 138 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 SLC1A2P43004 574 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 IDH3AP50213 366 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 ADARP55265 1226 aaKnown RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 RAB10P61026 200 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 MPP1Q00013 466 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 INSM1Q01101 510 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 HHEXQ03014 270 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 FOXC1Q12948 553 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 RPA4Q13156 261 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 USP10Q14694 798 aaKnown RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 ZYG11AQ6WRX3 759 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 FAM83HQ6ZRV2 1179 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 RINLQ6ZS11 566 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 TMPRSS7Q7RTY8 843 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 MAVSQ7Z434 540 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 LDB1Q86U70 411 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 TREML1Q86YW5 311 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 CILP2Q8IUL8 1156 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 DENND6AQ8IWF6 608 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 RBM12BQ8IXT5 1001 aaKnown RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 CFAP206Q8IYR0 622 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 CHCHD4Q8N4Q1 142 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 NAT14Q8WUY8 206 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 GPR78Q96P69 363 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 PANX3Q96QZ0 392 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 EBF4Q9BQW3 602 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 MMADHCQ9H3L0 296 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-217ENST00000611848 COG4Q9H9E3 785 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 POT1Q9NUX5 634 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 OXSMQ9NWU1 459 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 TAS2R1Q9NYW7 299 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 CPNE7Q9UBL6 633 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 GNPTGQ9UJJ9 305 aa8.61□□□□□ -1.03
SMAD4-217ENST00000611848 BPTFQ12830 3046 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 TRBV23OR9-2A0A075B6M9 112 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 FAM95CA0A1B0GW59 222 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 H3BMM5 538 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 LIN7AO14910 233 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 PPM1DO15297 605 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 GYG2O15488 501 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 MT-CO3P00414 261 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 VIPP01282 170 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 SLC19A1P41440 591 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CD151P48509 253 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 UBE2IP63279 158 aaKnown RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 SHC2P98077 582 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 POU4F1Q01851 419 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 ILF2Q12905 390 aaKnown RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CTBP1Q13363 440 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CLCA4Q14CN2 919 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CLPPQ16740 277 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 ZNF658BQ4V348 819 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 HES3Q5TGS1 186 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CDCP2Q5VXM1 449 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 ZNF470Q6ECI4 717 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 NAPRTQ6XQN6 538 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 SPRED1Q7Z699 444 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 TRIM48Q8IWZ4 208 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 CENPLQ8N0S6 344 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 STON2Q8WXE9 905 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 SLC38A3Q99624 504 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 P2RY12Q9H244 342 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 LRRN3Q9H3W5 708 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 UCK1Q9HA47 277 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 INTS10Q9NVR2 710 aaKnown RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 PNPOQ9NVS9 261 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 ARMCX1Q9P291 453 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms