RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PCDHB3Q9Y5E6 796 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 PCDHGA6Q9Y5G7 932 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 MAP3K7O43318 606 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 CPNE3O75131 537 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 TTC4O95801 387 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 ERVK-10P10266 1014 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 TCN2P20062 427 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 KLHL38Q2WGJ6 581 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 BBS9Q3SYG4 887 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 CRTC2Q53ET0 693 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 KCNMB4Q86W47 210 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 ZNF843Q8N446 348 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 RAD51AP1Q96B01 352 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 LRFN5Q96NI6 719 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 KRT12Q99456 494 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 NAT9Q9BTE0 207 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 FANCEQ9HB96 536 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 IARS2Q9NSE4 1012 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 KLHL42Q9P2K6 505 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 TSR3Q9UJK0 312 aaKnown RBP17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 SERTAD3Q9UJW9 196 aa17.83■□□□□ 0.44
SHKBP1-202ENST00000593764 E5RI56 91 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 SEC31AO94979 1220 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 PRKAR1AP10644 381 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 GABRB3P28472 473 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 OAS2P29728 719 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 RORAP35398 523 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 CCNFP41002 786 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 ITGA8P53708 1063 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 ETF1P62495 437 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 TIAL1Q01085 375 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 CDC20Q12834 499 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 DNASE1L3Q13609 305 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 SPANXN3Q5MJ09 141 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 HP1BP3Q5SSJ5 553 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 ATP1A1-AS1Q5TC04 95 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 LCN10Q6JVE6 187 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 TTC23LQ6PF05 361 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 TAX1BP1Q86VP1 789 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 DNAJC22Q8N4W6 341 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 C2CD4AQ8NCU7 369 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 KCNJ9Q92806 393 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 MED8Q96G25 268 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 FOPNLQ96NB1 174 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 RUFY1Q96T51 708 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 FAM167BQ9BTA0 163 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 SLC39A10Q9ULF5 831 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 KLHL20Q9Y2M5 609 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 DHRS7Q9Y394 339 aa17.82■□□□□ 0.44
SHKBP1-202ENST00000593764 C21orf140B9A014 251 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 SMAPO00193 183 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 KATNA1O75449 491 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 PSIP1O75475 530 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 CTSBP07858 339 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 FAM87AP0C7U9 286 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 ELK3P41970 407 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 ITGA1P56199 1179 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 MRPS25P82663 173 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 MC1RQ01726 317 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 BORAQ6PGQ7 559 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 CYHR1Q6ZMK1 362 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 CNTN4Q8IWV2 1026 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 DSELQ8IZU8 1212 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 SPATA4Q8NEY3 305 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 HMGCLL1Q8TB92 370 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 SLC22A18Q96BI1 424 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 SNF8Q96H20 258 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 CATSPER2Q96P56 530 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 AARSD1Q9BTE6 412 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 RAB11FIP5Q9BXF6 653 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 TRIM31Q9BZY9 425 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 PCMTD2Q9NV79 361 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 KCND3Q9UK17 655 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 MRFAP1Q9Y605 127 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 COMMD10Q9Y6G5 202 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 TEX264Q9Y6I9 313 aa17.81■□□□□ 0.44
SHKBP1-202ENST00000593764 A0A1W2PPV9 198 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 ARHGEF33A8MVX0 844 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 EFCAB8A8MWE9 144 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 MEN1O00255 615 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 ZNF749O43361 778 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 AHSGP02765 367 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 FURINP09958 794 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CYP2A7P20853 494 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 MAGP20916 626 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CASQ1P31415 396 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 RPL21P46778 160 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CUL1Q13616 776 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 HIF1AQ16665 826 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CYP2A13Q16696 494 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 DEFB110Q30KQ9 67 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 C16orf46Q6P387 395 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 SYT10Q6XYQ8 523 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 NEK10Q6ZWH5 1172 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 CD200R1Q8TD46 325 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 MAGEC3Q8TD91 643 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 INPP5DQ92835 1189 aa17.8■□□□□ 0.44
SHKBP1-202ENST00000593764 LRRC39Q96DD0 335 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms