RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 SKA2Q8WVK7 121 aaPredicted RBP16.34■□□□□ 0.21
TRIM47-203ENST00000586495 DLG3Q92796 817 aa16.34■□□□□ 0.21
TRIM47-203ENST00000586495 RAD51AP1Q96B01 352 aa16.34■□□□□ 0.21
TRIM47-203ENST00000586495 FOPNLQ96NB1 174 aa16.34■□□□□ 0.21
TRIM47-203ENST00000586495 NDC1Q9BTX1 674 aa16.34■□□□□ 0.21
TRIM47-203ENST00000586495 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
TRIM47-203ENST00000586495 SOX13Q9UN79 622 aa16.34■□□□□ 0.21
TRIM47-203ENST00000586495 ASH1LQ9NR48 2969 aaKnown RBP16.33■□□□□ 0.21
TRIM47-203ENST00000586495 H3BMM5 538 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 RASGRF2O14827 1237 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 HCRTR1O43613 425 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 VAPBO95292 243 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 FKBP9O95302 570 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 IGHEP01854 428 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 PAMP19021 973 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 CXCR5P32302 372 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 FOLR3P41439 243 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 ARSFP54793 590 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 EIF3BP55884 814 aaKnown RBP16.33■□□□□ 0.2
TRIM47-203ENST00000586495 GRB7Q14451 532 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 ZC3H12BQ5HYM0 836 aaKnown RBP16.33■□□□□ 0.2
TRIM47-203ENST00000586495 RNF187Q5TA31 235 aaPredicted RBP16.33■□□□□ 0.2
TRIM47-203ENST00000586495 C1orf189Q5VU69 101 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 FAM69BQ5VUD6 431 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 PAPD7Q5XG87 772 aaKnown RBP16.33■□□□□ 0.2
TRIM47-203ENST00000586495 HPS6Q86YV9 775 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 LINC01555Q8NAE3 123 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 MAGEC3Q8TD91 643 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 MIB2Q96AX9 1013 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 MFSD3Q96ES6 412 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 IL17FQ96PD4 163 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 GBP5Q96PP8 586 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 TCF12Q99081 682 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 MENTQ9BUN1 341 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 SYBUQ9NX95 663 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 EURLQ9NYK6 297 aa16.33■□□□□ 0.2
TRIM47-203ENST00000586495 DHCR7Q9UBM7 475 aaKnown RBP16.33■□□□□ 0.2
TRIM47-203ENST00000586495 TTC7AQ9ULT0 858 aaPredicted RBP16.33■□□□□ 0.2
TRIM47-203ENST00000586495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.32■□□□□ 0.2
TRIM47-203ENST00000586495 ZNF185O15231 689 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 DPM1O60762 260 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 CEACAM4O75871 244 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 C1orf105O95561 183 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 OTX2P32243 289 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 CCNFP41002 786 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 ATP1A4Q13733 1029 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 SF1Q15637 639 aaKnown RBP16.32■□□□□ 0.2
TRIM47-203ENST00000586495 FIGLAQ6QHK4 219 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 CES3Q6UWW8 571 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 MCATQ8IVS2 390 aaKnown RBP16.32■□□□□ 0.2
TRIM47-203ENST00000586495 FAM20CQ8IXL6 584 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 C2orf73Q8N5S3 287 aaPredicted RBP16.32■□□□□ 0.2
TRIM47-203ENST00000586495 PRELID2Q8N945 189 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 FER1L6-AS2Q96M78 137 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 CIDEBQ9UHD4 219 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 MED13Q9UHV7 2174 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 PLAAQ9Y263 795 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 PPP2R2CQ9Y2T4 447 aa16.32■□□□□ 0.2
TRIM47-203ENST00000586495 PTRH2Q9Y3E5 179 aaKnown RBP16.32■□□□□ 0.2
TRIM47-203ENST00000586495 TTLL8A6PVC2 850 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 PEX12O00623 359 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 KLF7O75840 302 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-203ENST00000586495 PIM1P11309 404 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-203ENST00000586495 OGNP20774 298 aaKnown RBP16.31■□□□□ 0.2
TRIM47-203ENST00000586495 ALAS2P22557 587 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 ARNTP27540 789 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 FMO4P31512 558 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 CD97P48960 835 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 MLLT10P55197 1068 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 CCZ1BP86790 482 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 CCZ1P86791 482 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-203ENST00000586495 GPS1Q13098 491 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 KCNJ11Q14654 390 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 TRIP13Q15645 432 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-203ENST00000586495 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 NKAIN1Q4KMZ8 207 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 TCTE1Q5JU00 501 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 KIAA0930Q6ICG6 404 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-203ENST00000586495 TAX1BP1Q86VP1 789 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 EFCAB3Q8N7B9 438 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 FDCSPQ8NFU4 85 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 OR2Y1Q8NGV0 311 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 ZUFSPQ96AP4 578 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 PBKQ96KB5 322 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 GPR83Q9NYM4 423 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 SAMD15Q9P1V8 674 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 VPS9D1Q9Y2B5 631 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 KLHL20Q9Y2M5 609 aa16.31■□□□□ 0.2
TRIM47-203ENST00000586495 TCRBV7S3A2A0A539 114 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 TARM1B6A8C7 271 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 KLHL41O60662 606 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 KRT14P02533 472 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 ESR1P03372 595 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 CTSBP07858 339 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 ATXN8OSP0DMR3 200 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 MAGEA6P43360 314 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 VPS41P49754 854 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 TERF1P54274 439 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 ADARP55265 1226 aaKnown RBP16.3■□□□□ 0.2
TRIM47-203ENST00000586495 UBAP2LQ14157 1087 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms