RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SFTPCP11686 197 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 PGAM1P18669 254 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 ATP5DP30049 168 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 CCNFP41002 786 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 SLC1A2P43004 574 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 RPS15P62841 145 aaKnown RBP19.7■□□□□ 0.74
SS18-224ENST00000584083 DHX9Q08211 1270 aaKnown RBP19.7■□□□□ 0.74
SS18-224ENST00000584083 ZIC1Q15915 447 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 DEFB110Q30KQ9 67 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 BBS9Q3SYG4 887 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 CRTC2Q53ET0 693 aaPredicted RBP19.7■□□□□ 0.74
SS18-224ENST00000584083 HSP90AA5PQ58FG0 334 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 ACSBG2Q5FVE4 666 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 MAGEC3Q8TD91 643 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 FAM167BQ9BTA0 163 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 TWSG1Q9GZX9 223 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 FBXO5Q9UKT4 447 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 PCDHGA6Q9Y5G7 932 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 MEN1O00255 615 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 CREG1O75629 220 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 OR2B3O76000 313 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 IVDP26440 423 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 GBX1Q14549 363 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 CRYMQ14894 314 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 MORF4L2Q15014 288 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 SF1Q15637 639 aaKnown RBP19.69■□□□□ 0.74
SS18-224ENST00000584083 KLHL38Q2WGJ6 581 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 TTLL9Q3SXZ7 439 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 CCSMST1Q4G0I0 132 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 KCNMB4Q86W47 210 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 LRFN5Q96NI6 719 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 RUFY1Q96T51 708 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 EBNA1BP2Q99848 306 aaKnown RBP19.69■□□□□ 0.74
SS18-224ENST00000584083 TRIM51Q9BSJ1 452 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 NAT9Q9BTE0 207 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 GPR87Q9BY21 358 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 CHRNA10Q9GZZ6 450 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 CHST8Q9H2A9 424 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 ACTL8Q9H568 366 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 IARS2Q9NSE4 1012 aaKnown RBP19.69■□□□□ 0.74
SS18-224ENST00000584083 IRAK4Q9NWZ3 460 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 RNF14Q9UBS8 474 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 KLHL20Q9Y2M5 609 aa19.69■□□□□ 0.74
SS18-224ENST00000584083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.69■□□□□ 0.744e-6■■■□□ 17.6
SS18-224ENST00000584083 FASNP49327 2511 aaKnown RBP19.68■□□□□ 0.74
SS18-224ENST00000584083 KRT87PA6NCN2 255 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 TTI1O43156 1089 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 ZNF749O43361 778 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 MATN4O95460 622 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 TTC4O95801 387 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 ERVK-10P10266 1014 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 MAGP20916 626 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 PTPN4P29074 926 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 POLE2P56282 527 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 MPP1Q00013 466 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 MSS51Q4VC12 460 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 SPANXN3Q5MJ09 141 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 ZNF549Q6P9A3 640 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 DSELQ8IZU8 1212 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 PDIK1LQ8N165 341 aa19.68■□□□□ 0.74
SS18-224ENST00000584083 GABPB2Q8TAK5 448 aaPredicted RBP19.68■□□□□ 0.74
SS18-224ENST00000584083 INTS7Q9NVH2 962 aaKnown RBP19.68■□□□□ 0.74
SS18-224ENST00000584083 FARSAQ9Y285 508 aaKnown RBP19.68■□□□□ 0.74
SS18-224ENST00000584083 CDC14CA4D256 554 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 HCRTR1O43613 425 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 HAUS5O94927 633 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 HBQ1P09105 142 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 CLCN7P51798 805 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 RPS18P62269 152 aaKnown RBP19.67■□□□□ 0.74
SS18-224ENST00000584083 NFATC3Q12968 1075 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 HP1BP3Q5SSJ5 553 aaPredicted RBP19.67■□□□□ 0.74
SS18-224ENST00000584083 ZNF605Q86T29 641 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 APOBEC4Q8WW27 367 aaKnown RBP19.67■□□□□ 0.74
SS18-224ENST00000584083 KRT12Q99456 494 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 SLC30A3Q99726 388 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 TRIM31Q9BZY9 425 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 SPRTNQ9H040 489 aaPredicted RBP19.67■□□□□ 0.74
SS18-224ENST00000584083 ADNPQ9H2P0 1102 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 FAM114A2Q9NRY5 505 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 PCMTD2Q9NV79 361 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 GEMIN8Q9NWZ8 242 aaKnown RBP19.67■□□□□ 0.74
SS18-224ENST00000584083 PLCL2Q9UPR0 1127 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 COMMD10Q9Y6G5 202 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 AP1M2Q9Y6Q5 423 aa19.67■□□□□ 0.74
SS18-224ENST00000584083 SMG1Q96Q15 3661 aaKnown RBP19.66■□□□□ 0.74
SS18-224ENST00000584083 SMAPO00193 183 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 FANCGO15287 622 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 CATP04040 527 aaKnown RBP19.66■□□□□ 0.74
SS18-224ENST00000584083 FURINP09958 794 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 RORAP35398 523 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 GABRA4P48169 554 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 ITGA8P53708 1063 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 KCNAB2Q13303 367 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 CUL1Q13616 776 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 PTCHD3Q3KNS1 767 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 ZNF517Q6ZMY9 492 aaPredicted RBP19.66■□□□□ 0.74
SS18-224ENST00000584083 IGDCC3Q8IVU1 814 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 SYTL1Q8IYJ3 562 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 C17orf53Q8N3J3 647 aaPredicted RBP19.66■□□□□ 0.74
SS18-224ENST00000584083 DNAJC22Q8N4W6 341 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms