RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 GABRA4P48169 554 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 MRPS25P82663 173 aaKnown RBP15.11■□□□□ 0.01
CIT-210ENST00000539413 CDC20Q12834 499 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 DNASE1L3Q13609 305 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 CUL1Q13616 776 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 KLHL38Q2WGJ6 581 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 SPANXN3Q5MJ09 141 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 ATP1A1-AS1Q5TC04 95 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 C16orf46Q6P387 395 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 PDIK1LQ8N165 341 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 DENND1AQ8TEH3 1009 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 KCNJ9Q92806 393 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 TCTN2Q96GX1 697 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 SNF8Q96H20 258 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 WDR83Q9BRX9 315 aaKnown RBP15.11■□□□□ 0.01
CIT-210ENST00000539413 NAT9Q9BTE0 207 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 CCDC68Q9H2F9 335 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 PLAC1Q9HBJ0 212 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 SERTAD3Q9UJW9 196 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 KLHL20Q9Y2M5 609 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 PCDHB3Q9Y5E6 796 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 MRFAP1Q9Y605 127 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 ATMQ13315 3056 aa15.11■□□□□ 0.01
CIT-210ENST00000539413 EFCAB8A8MWE9 144 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 TP73O15350 636 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 SEC31AO94979 1220 aaKnown RBP15.1■□□□□ 0.01
CIT-210ENST00000539413 TTC4O95801 387 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 FAM87AP0C7U9 286 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CYP2A7P20853 494 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 MAGP20916 626 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CASQ1P31415 396 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CCNFP41002 786 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 ELK3P41970 407 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 ITGA1P56199 1179 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 ETF1P62495 437 aaKnown RBP15.1■□□□□ 0.01
CIT-210ENST00000539413 TTLL9Q3SXZ7 439 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.1■□□□□ 0.01
CIT-210ENST00000539413 SYT10Q6XYQ8 523 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 C2CD4AQ8NCU7 369 aaPredicted RBP15.1■□□□□ 0.01
CIT-210ENST00000539413 MR1Q95460 341 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CLIP3Q96DZ5 547 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CERS2Q96G23 380 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CFAP36Q96G28 342 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 GPR21Q99679 349 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CHRNA10Q9GZZ6 450 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 KCND3Q9UK17 655 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 CHMP2BQ9UQN3 213 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 PCDHGA6Q9Y5G7 932 aa15.1■□□□□ 0.01
CIT-210ENST00000539413 AHCTF1Q8WYP5 2266 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 ARHGEF33A8MVX0 844 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 E7EQ34 232 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 H3BMH7 237 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 SMAPO00193 183 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 MEN1O00255 615 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 PRICKLE3O43900 615 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 PSIP1O75475 530 aaKnown RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 CTSBP07858 339 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 GABRB3P28472 473 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 RORAP35398 523 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 RPL21P46778 160 aaKnown RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 MC1RQ01726 317 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 ERV3-1Q14264 604 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 SF1Q15637 639 aaKnown RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 HIF1AQ16665 826 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 CRTC2Q53ET0 693 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 LCN10Q6JVE6 187 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 BORAQ6PGQ7 559 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 ZNF517Q6ZMY9 492 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 DSELQ8IZU8 1212 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 ZNF843Q8N446 348 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 DNAJC22Q8N4W6 341 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 SPATA4Q8NEY3 305 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 CD200R1Q8TD46 325 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 MAGEC3Q8TD91 643 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 N4BP2L2Q92802 583 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 SLC22A18Q96BI1 424 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 MED8Q96G25 268 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 LRFN5Q96NI6 719 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 CATSPER2Q96P56 530 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 NDNQ99608 321 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 AARSD1Q9BTE6 412 aaKnown RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 SPRTNQ9H040 489 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 CHST8Q9H2A9 424 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 ACTR5Q9H9F9 607 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 PCMTD2Q9NV79 361 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.09■□□□□ 0.01
CIT-210ENST00000539413 KLHL42Q9P2K6 505 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 SLC17A6Q9P2U8 582 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 SNX24Q9Y343 169 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 DHRS7Q9Y394 339 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 COMMD10Q9Y6G5 202 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 TEX264Q9Y6I9 313 aa15.09■□□□□ 0.01
CIT-210ENST00000539413 C21orf140B9A014 251 aa15.08■□□□□ 0
CIT-210ENST00000539413 ZNF749O43361 778 aa15.08■□□□□ 0
CIT-210ENST00000539413 CREG1O75629 220 aa15.08■□□□□ 0
CIT-210ENST00000539413 OR2B3O76000 313 aa15.08■□□□□ 0
CIT-210ENST00000539413 KLK3P07288 261 aaPredicted RBP15.08■□□□□ 0
CIT-210ENST00000539413 FURINP09958 794 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms