RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CRYMQ14894 314 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 SLC5A12Q1EHB4 618 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 KLHL38Q2WGJ6 581 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 BORAQ6PGQ7 559 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 SYDE1Q6ZW31 735 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 KCNMB4Q86W47 210 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 OR2L8Q8NGY9 312 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 N4BP2L2Q92802 583 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 RAD51AP1Q96B01 352 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 TCTN2Q96GX1 697 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 FOPNLQ96NB1 174 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 KRT12Q99456 494 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 EBNA1BP2Q99848 306 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 SLC7A5P2Q9GIP4 190 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 TWSG1Q9GZX9 223 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 CHST8Q9H2A9 424 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 CCDC68Q9H2F9 335 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 LATS2Q9NRM7 1088 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 PCDHB3Q9Y5E6 796 aa12.39□□□□□ -0.43
TRAPPC4-205ENST00000525079 CDC14CA4D256 554 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 E7EQ34 232 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 CCDC188H7C350 402 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 MEN1O00255 615 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZNF749O43361 778 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 MATN4O95460 622 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 KLK3P07288 261 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 MAGP20916 626 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 PSMB5P28074 263 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ELK3P41970 407 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 GABRA4P48169 554 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 CLCN7P51798 805 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ITGA8P53708 1063 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ITGA1P56199 1179 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 MC1RQ01726 317 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 SF1Q15637 639 aaKnown RBP12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 PTCHD3Q3KNS1 767 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 DNAJC22Q8N4W6 341 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 GIMAP7Q8NHV1 300 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 CALML6Q8TD86 181 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 CFAP36Q96G28 342 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 RUNDC3BQ96NL0 473 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 NDNQ99608 321 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 GPR21Q99679 349 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ACTL8Q9H568 366 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ACTR5Q9H9F9 607 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 SYTL2Q9HCH5 934 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 PCMTD2Q9NV79 361 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 KCND3Q9UK17 655 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 MED16Q9Y2X0 877 aa12.38□□□□□ -0.43
TRAPPC4-205ENST00000525079 ARHGEF33A8MVX0 844 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CREG1O75629 220 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 OR2B3O76000 313 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 MSL3P1P0C860 447 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CASQ1P31415 396 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CCNFP41002 786 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 GRIA3P42263 894 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CCR10P46092 362 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CARSP49589 748 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 NFATC3Q12968 1075 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 MORF4L2Q15014 288 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 SPANXN3Q5MJ09 141 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 C1orf189Q5VU69 101 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 FAM69BQ5VUD6 431 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 HIBCHQ6NVY1 386 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 ANKMY2Q8IV38 441 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 LMNTD2Q8IXW0 634 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 GPR135Q8IZ08 494 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 DSELQ8IZU8 1212 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 PDIK1LQ8N165 341 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CATSPER2Q96P56 530 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 MIPEPQ99797 713 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 PPANQ9NQ55 473 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 IRAK4Q9NWZ3 460 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 SLC17A6Q9P2U8 582 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 CHMP2BQ9UQN3 213 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 FARSAQ9Y285 508 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 SNX24Q9Y343 169 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 PCDHGA6Q9Y5G7 932 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 ATMQ13315 3056 aa12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 SNRNP200O75643 2136 aaKnown RBP12.37□□□□□ -0.43
TRAPPC4-205ENST00000525079 EFCAB8A8MWE9 144 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 C21orf140B9A014 251 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 H3BMH7 237 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 PRICKLE3O43900 615 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 SEC31AO94979 1220 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 TTC4O95801 387 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 CBSLP0DN79 551 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 SPTBP11277 2137 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 GABRB3P28472 473 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 PTPN4P29074 926 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 ATP5DP30049 168 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 RORAP35398 523 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 CBSP35520 551 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms