RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 MAK16Q9BXY0 300 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 MUC13Q9H3R2 512 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 ZCCHC4Q9H5U6 513 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 VPS37BQ9H9H4 285 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 KIF9Q9HAQ2 790 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 POPDC2Q9HBU9 364 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 LRRC4Q9HBW1 653 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 CD248Q9HCU0 757 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 MLXIPLQ9NP71 852 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 ARHGEF3Q9NR81 526 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 PIGVQ9NUD9 493 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 INTS9Q9NV88 658 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 PAK5Q9P286 719 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 RCOR3Q9P2K3 495 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 PSMC3IPQ9P2W1 217 aaPredicted RBP4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 DKK2Q9UBU2 259 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 XPO7Q9UIA9 1087 aaKnown RBP4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 CDH9Q9ULB4 789 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 NEU3Q9UQ49 428 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 CHMP2BQ9UQN3 213 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 HEY1Q9Y5J3 304 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 SNX10Q9Y5X0 201 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM169AQ9Y6X4 670 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 DNAH12Q6ZR08 3092 aa4.8□□□□□ -1.64
CTNNA1-212ENST00000518919 CEP350Q5VT06 3117 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FRMPD3Q5JV73 1810 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 CENPFP49454 3210 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 SYNJ2BP-COX16A0A087WUM0 186 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TEX13CA0A0J9YWL9 993 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 hCG_1807616A0A1W2PRN6 198 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 WDR27A2RRH5 827 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 YJEFN3A6XGL0 299 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 KBTBD13C9JR72 458 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 E7ENQ6 273 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 POC1B-GALNT4F8VUJ3 575 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM72CH0Y354 149 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PER2O15055 1255 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PRPF4O43172 522 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 GCATO75600 419 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PIAS1O75925 651 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 KAT7O95251 611 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 C1RP00736 705 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 MBPP02686 304 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 NPSP0C0P6 89 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 ARSAP15289 507 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 DESP17661 470 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TYMPP19971 482 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TPSB2P20231 275 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PRPH2P23942 346 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FPR3P25089 353 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 ITPKBP27987 946 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 NDUFS1P28331 727 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 ATP5DP30049 168 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 SSTR1P30872 391 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 STIP1P31948 543 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FOXN2P32314 431 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 HNF1BP35680 557 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 ELK3P41970 407 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 NR2C2P49116 596 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 ACLYP53396 1101 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 MVDP53602 400 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 UFM1P61960 85 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 MC1RQ01726 317 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 SP3Q02447 781 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 CREB5Q02930 508 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 DSC1Q08554 894 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 LMAN2Q12907 356 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 CHAF1BQ13112 559 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 XRCC4Q13426 336 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PAFAH1B3Q15102 231 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TPSAB1Q15661 275 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TCTN1Q2MV58 587 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 AP5B1Q2VPB7 878 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 KLHL38Q2WGJ6 581 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 DCAF6Q58WW2 860 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 SH2D4BQ5SQS7 431 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM72AQ5TYM5 149 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM72DQ6L9T8 149 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 CGB2Q6NT52 195 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM171BQ6P995 826 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 KIRREL2Q6UWL6 708 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 KYAT3Q6YP21 454 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 DENND5BQ6ZUT9 1274 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 IKBIPQ70UQ0 350 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TAOK1Q7L7X3 1001 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 RRM2BQ7LG56 351 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 WDR53Q7Z5U6 358 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 GALNT7Q86SF2 657 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TADA2BQ86TJ2 420 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 TAC4Q86UU9 113 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 FAM72BQ86X60 149 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 PSTKQ8IV42 348 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 SFTPA1Q8IWL2 248 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 NPWQ8N729 165 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 C12orf76Q8N812 135 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 MCUQ8NE86 351 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 ABHD11Q8NFV4 315 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 DENND1AQ8TEH3 1009 aa4.79□□□□□ -1.64
CTNNA1-212ENST00000518919 CKAP2Q8WWK9 683 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms