RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 NAPRTQ6XQN6 538 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 TIPARPQ7Z3E1 657 aaKnown RBP13.14□□□□□ -0.31
SFXN4-208ENST00000490417 KRT222Q8N1A0 295 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.14□□□□□ -0.31
SFXN4-208ENST00000490417 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 LPGAT1Q92604 370 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 ZNF501Q96CX3 271 aaPredicted RBP13.14□□□□□ -0.31
SFXN4-208ENST00000490417 CLIP3Q96DZ5 547 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 TRAPPC9Q96Q05 1148 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 SLC12A9Q9BXP2 914 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 IRAK4Q9NWZ3 460 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 ICKQ9UPZ9 632 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 CRYL1Q9Y2S2 319 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 ATRXP46100 2492 aa13.14□□□□□ -0.31
SFXN4-208ENST00000490417 RASGRF2O14827 1237 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 ENO3P13929 434 aaPredicted RBP13.13□□□□□ -0.31
SFXN4-208ENST00000490417 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 UGT2B7P16662 529 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 AGXTP21549 392 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 ARNTP27540 789 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 MAGEA3P43357 314 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 ITGA1P56199 1179 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 GPR19Q15760 415 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 IZUMO3Q5VZ72 239 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 LRRC8EQ6NSJ5 796 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 C19orf47Q8N9M1 422 aaKnown RBP13.13□□□□□ -0.31
SFXN4-208ENST00000490417 KCNJ9Q92806 393 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 EXTL1Q92935 676 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 LRRC39Q96DD0 335 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 BIRC8Q96P09 236 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 BBC3Q96PG8 261 aaPredicted RBP13.13□□□□□ -0.31
SFXN4-208ENST00000490417 UTP6Q9NYH9 597 aaKnown RBP13.13□□□□□ -0.31
SFXN4-208ENST00000490417 CROTQ9UKG9 612 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 PCDHGA6Q9Y5G7 932 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
SFXN4-208ENST00000490417 MGAQ8IWI9 3026 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 CATP04040 527 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 NTRK1P04629 796 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ZNF28P17035 718 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 PKLRP30613 574 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 CASQ1P31415 396 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SKIV2L2P42285 1042 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ARL4CP56559 192 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 CDC20Q12834 499 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SRSF6Q13247 344 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SF1Q15637 639 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 TBR1Q16650 682 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ZC3H12BQ5HYM0 836 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 C16orf46Q6P387 395 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 TLDC1Q6P9B6 456 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 NEK10Q6ZWH5 1172 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 KCNMB4Q86W47 210 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 CREG2Q8IUH2 290 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 PALM2Q8IXS6 379 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 UNC5BQ8IZJ1 945 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ZBTB2Q8N680 514 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 APOBEC4Q8WW27 367 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 MR1Q95460 341 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ZUFSPQ96AP4 578 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SIGLEC10Q96LC7 697 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 OR2A14Q96R47 310 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 EBNA1BP2Q99848 306 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 ACTR5Q9H9F9 607 aaPredicted RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 PPANQ9NQ55 473 aaKnown RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 TUBD1Q9UJT1 453 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SRPK3Q9UPE1 567 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 CDYLQ9Y232 598 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 POLHQ9Y253 713 aa13.12□□□□□ -0.31
SFXN4-208ENST00000490417 HEMK1Q9Y5R4 338 aaPredicted RBP13.12□□□□□ -0.31
SFXN4-208ENST00000490417 SMG1Q96Q15 3661 aaKnown RBP13.11□□□□□ -0.31
SFXN4-208ENST00000490417 ZCWPW2A0A1B0GU75 182 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 PABPN1LA6NDY0 278 aaKnown RBP13.11□□□□□ -0.31
SFXN4-208ENST00000490417 USP27XA6NNY8 438 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 C9J4A7 227 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 EIF3FO00303 357 aaPredicted RBP13.11□□□□□ -0.31
SFXN4-208ENST00000490417 VPS26AO75436 327 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 OR2B3O76000 313 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 C1orf105O95561 183 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 CBSLP0DN79 551 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 CBSP35520 551 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 CTSL3PQ5NE16 218 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 CNSTQ6PJW8 725 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 KIAA0408Q6ZU52 694 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 CENPUQ71F23 418 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 ZNF605Q86T29 641 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 LKAAEAR1Q8TD35 194 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 THAP4Q8WY91 577 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 DLG3Q92796 817 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 INPP5DQ92835 1189 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 SNF8Q96H20 258 aa13.11□□□□□ -0.31
SFXN4-208ENST00000490417 CDK15Q96Q40 435 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms