RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 DNALI1O14645 258 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 RASGRF2O14827 1237 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 AVILO75366 819 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CREG1O75629 220 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 SCRG1O75711 98 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 TMEM63AO94886 807 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 C1orf105O95561 183 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 TTC4O95801 387 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 ONECUT2O95948 504 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 PRB1P04280 392 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CAPN1P07384 714 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 PKMP14618 531 aaKnown RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 PTPN4P29074 926 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 PKLRP30613 574 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 RORAP35398 523 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 DLSTP36957 453 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 HSD17B2P37059 387 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CCR10P46092 362 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 ITGA1P56199 1179 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 RPS15P62841 145 aaKnown RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 CRADDP78560 199 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 RELAQ04206 551 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CDC20Q12834 499 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 DNASE1L3Q13609 305 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 DHX34Q14147 1143 aaKnown RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 LY6DQ14210 128 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 KCNAB1Q14722 419 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 ARHGAP19Q14CB8 494 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 BRD3Q15059 726 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 TMED2Q15363 201 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 TRIP13Q15645 432 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 GPR19Q15760 415 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 SYTL3Q4VX76 610 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CTSL3PQ5NE16 218 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 RNASEH2BQ5TBB1 312 aaKnown RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 ANKRD22Q5VYY1 191 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CDHR3Q6ZTQ4 885 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 MICALCLQ6ZW33 695 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CENPUQ71F23 418 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 OTOAQ7RTW8 1153 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 GALNT7Q86SF2 657 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 ZNF605Q86T29 641 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 SYVN1Q86TM6 617 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 LDB1Q86U70 411 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 CREG2Q8IUH2 290 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 APLFQ8IW19 511 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 DCUN1D3Q8IWE4 304 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 DSELQ8IZU8 1212 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 LMNTD1Q8N9Z9 388 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 SLC38A9Q8NBW4 561 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 FBXO15Q8NCQ5 510 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 OR1L3Q8NH93 324 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 GABPB2Q8TAK5 448 aaPredicted RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 DENND1AQ8TEH3 1009 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 THAP4Q8WY91 577 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 STARD8Q92502 1023 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 NACC2Q96BF6 587 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 LRRC39Q96DD0 335 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 STAMBPL1Q96FJ0 436 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 PPM1MQ96MI6 270 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 FOPNLQ96NB1 174 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 ZNF285Q96NJ3 590 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 USB1Q9BQ65 265 aaKnown RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 ARHGAP9Q9BRR9 750 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 DHRS4Q9BTZ2 278 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 RAB11FIP5Q9BXF6 653 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 NLNQ9BYT8 704 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 SLC25A18Q9H1K4 315 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 XKR8Q9H6D3 395 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 CROTQ9UKG9 612 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 POLHQ9Y253 713 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 DHRS7Q9Y394 339 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 KCNMB2Q9Y691 235 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 GCN1Q92616 2671 aaKnown RBP6.76□□□□□ -1.33
VPS50-218ENST00000485994 E7EQ34 232 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 CCDC188H7C350 402 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 GFYI3L273 518 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 ZNF185O15231 689 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 SRPX2O60687 465 aaPredicted RBP6.75□□□□□ -1.33
VPS50-218ENST00000485994 PSIP1O75475 530 aaKnown RBP6.75□□□□□ -1.33
VPS50-218ENST00000485994 NTRK1P04629 796 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 MPC1LP0DKB6 136 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 CBSLP0DN79 551 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 ERGP11308 486 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 UGT2B7P16662 529 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 PEBP1P30086 187 aaKnown RBP6.75□□□□□ -1.33
VPS50-218ENST00000485994 FMO4P31512 558 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 CBSP35520 551 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 SKIV2L2P42285 1042 aaKnown RBP6.75□□□□□ -1.33
VPS50-218ENST00000485994 PTGIRP43119 386 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 CLCN7P51798 805 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 CYP4F2P78329 520 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 ABRQ12979 859 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 GPS2Q13227 327 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 THOC5Q13769 683 aaKnown RBP6.75□□□□□ -1.33
VPS50-218ENST00000485994 PTK6Q13882 451 aa6.75□□□□□ -1.33
VPS50-218ENST00000485994 FRG1Q14331 258 aaKnown RBP6.75□□□□□ -1.33
VPS50-218ENST00000485994 NAA25Q14CX7 972 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms