RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 OR12D2P58182 307 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 TMEM35AQ53FP2 167 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 DIRAS2Q96HU8 199 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 AP1S3Q96PC3 154 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 TMEM168Q9H0V1 697 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 ADAP2Q9NPF8 381 aa11.02□□□□□ -0.64
PRPF40A-202ENST00000410080 MIA3Q5JRA6 1907 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 NPIPA2E9PIF3 369 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 NPIPA3F8WFD2 350 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 SSX5O60225 188 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 SHOX2O60902 331 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 TGFB1P01137 390 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 ALADP13716 330 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 SEMA3AQ14563 771 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CLCA4Q14CN2 919 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 TWIST2Q8WVJ9 160 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CAVIN3Q969G5 261 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 SIPA1Q96FS4 1042 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 GLOD4Q9HC38 313 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 C2CD2Q9Y426 696 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 JUPP14923 745 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 FKBP1BP68106 108 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 COL9A2Q14055 689 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 YIPF7Q8N8F6 280 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 TEX13CA0A0J9YWL9 993 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PRAMEF12O95522 483 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 RLN2P04090 185 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 DSG2Q14126 1118 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 RAB30Q15771 203 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 GRASPQ7Z6J2 395 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 TMEM17Q86X19 198 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PHOSPHO1Q8TCT1 267 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PRR11Q96HE9 360 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 BCAS3Q9H6U6 928 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 HPF1Q9NWY4 346 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 A0A1B0GVT2 93 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CIB4A0PJX0 185 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 STK16O75716 305 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CDH4P55283 916 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 GTF2BQ00403 316 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 WASHC2DQ5SRD0 308 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 NET1Q7Z628 596 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CROCCP3Q8IVE0 287 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PIWIL1Q96J94 861 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 GPR20Q99678 358 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 MKKSQ9NPJ1 570 aaPredicted RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 TLR9Q9NR96 1032 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 C14orf166Q9Y224 244 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 ANKRD26Q9UPS8 1709 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 BLOC1S5-TXNDC5H3BN57 136 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 LAMTOR5O43504 91 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 RNF13O43567 381 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 GOT2P00505 430 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 RBMS1P29558 406 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF311Q5JNZ3 666 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 SH3PXD2AQ5TCZ1 1133 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 FBXW8Q8N3Y1 598 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PDPRQ8NCN5 879 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CMKLR1Q99788 373 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 CYP8B1Q9UNU6 501 aa11.02□□□□□ -0.65
PRPF40A-202ENST00000410080 PRAMEF33A0A0G2JMD5 474 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 C2orf71A6NGG8 1288 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 M0R129 80 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 PRAMEF10O60809 474 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 RNF144AP50876 292 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 LPAL2Q16609 132 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 NAPRTQ6XQN6 538 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ZNF709Q8N972 641 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 NLGN4YQ8NFZ3 816 aaPredicted RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 BAP1Q92560 729 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 MALT1Q9UDY8 824 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 A6NL46 340 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OR2AT4A6NND4 320 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 C9IYK1 514 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ITIH1P19827 911 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OTX2P32243 289 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 MARCKSL1P49006 195 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 GJA9P57773 515 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OLR1P78380 273 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 TIGD2Q4W5G0 525 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 EEF1DP3Q658K8 133 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 OR8H3Q8N146 312 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 SH3RF2Q8TEC5 729 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 RBM4BQ9BQ04 359 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ZSCAN5AQ9BUG6 496 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 RBM4Q9BWF3 364 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 DKK3Q9UBP4 350 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 ASCC3Q8N3C0 2202 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 DCCP43146 1447 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 CCL22O00626 93 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 MT-ND1P03886 318 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 GSTT2BP0CG30 244 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 EDNRAP25101 427 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 APLP1P51693 650 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 CDH11P55287 796 aa11.01□□□□□ -0.65
PRPF40A-202ENST00000410080 CHIT1Q13231 466 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms