RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 P2RX2Q9UBL9 471 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 TEX13CA0A0J9YWL9 993 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SEPT4O43236 478 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 PVALBP20472 110 aaPredicted RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 YAP1P46937 504 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 XKP51811 444 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 RAB39AQ14964 217 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 PTPN20Q4JDL3 420 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SPIN4Q56A73 249 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 PPM1JQ5JR12 505 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 HFE2Q6ZVN8 426 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CHIAQ9BZP6 476 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 DUSP11O75319 330 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SPATA31C1P0DKV0 1188 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 GRK5P34947 590 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 DCBLD1Q8N8Z6 715 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ABCB8Q9NUT2 735 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ESR1P03372 595 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 NMBRP28336 390 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ACSL1P33121 698 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SPIN3Q5JUX0 258 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SSX6Q7RTT6 188 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SLITRK4Q8IW52 837 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ZSCAN1Q8NBB4 408 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SIDT2Q8NBJ9 832 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SDHAF3Q9NRP4 125 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 TNFRSF10BO14763 440 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CRISP3P54108 245 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 AVL9Q8NBF6 648 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 RBM15BQ8NDT2 890 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 GRHL1Q9NZI5 618 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CXCR6O00574 342 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 FSCN2O14926 492 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 LIMK2P53671 638 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 PLEKHG6Q3KR16 790 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CIR1Q86X95 450 aaPredicted RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 COPS4Q9BT78 406 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CAPN8A6NHC0 703 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 NPHS1O60500 1241 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 CSTBP04080 98 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 L1CAMP32004 1257 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 NFKB2Q00653 900 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 IQCCQ4KMZ1 466 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 MFSD5Q6N075 450 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 MAF1Q9H063 256 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 NDUFS4O43181 175 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ITGA10O75578 1167 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ELNP15502 786 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 CD47Q08722 323 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 KLHL36Q8N4N3 616 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ARNTL2Q8WYA1 636 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ZFP3Q96NJ6 502 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 NMUR2Q9GZQ4 415 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 SPATA7Q9P0W8 599 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 EIF3KQ9UBQ5 218 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 MAFFQ9ULX9 164 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 KANTRA0A1W2PQU2 76 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 AP2S1P53680 142 aaPredicted RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 MSL3Q8N5Y2 521 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 HSD17B14Q9BPX1 270 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 UNC93B1Q9H1C4 597 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 CERS4Q9HA82 394 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ARL8BQ9NVJ2 186 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 C1orf109Q9NX04 203 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 EIF2B4Q9UI10 523 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 FAM234BA2RU67 622 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 TIE1P35590 1138 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 KCNJ5P48544 419 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 MADCAM1Q13477 382 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 CBR4Q8N4T8 237 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 TMEM125Q96AQ2 219 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ZC3H10Q96K80 434 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 CLDN25C9JDP6 229 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 PPEF2O14830 753 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 TRAPPC6AO75865 159 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 MYCLP1P12525 358 aaPredicted RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 NR2C1P13056 603 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 CAPZA1P52907 286 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ECT2LQ008S8 904 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 GHRHRQ02643 423 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 DPY19L1Q2PZI1 675 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 ADGRD1Q6QNK2 874 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 C7orf26Q96N11 449 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 GPR20Q99678 358 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 BRD7Q9NPI1 651 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 NUP50Q9UKX7 468 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 PXDNQ92626 1479 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 LAMA4Q16363 1823 aa11.81□□□□□ -0.52
SMCR8-201ENST00000406438 PRRC2BQ5JSZ5 2229 aaKnown RBP11.81□□□□□ -0.52
SMCR8-201ENST00000406438 SH3D21A4FU49 640 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms