RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 TRIM31Q9BZY9 425 aa22.34■■□□□ 1.17
HMGA2-202ENST00000393577 KCND3Q9UK17 655 aa22.34■■□□□ 1.17
HMGA2-202ENST00000393577 PCDHB3Q9Y5E6 796 aa22.34■■□□□ 1.17
HMGA2-202ENST00000393577 TTC4O95801 387 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 CYP2A7P20853 494 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 OAS2P29728 719 aaKnown RBP22.33■■□□□ 1.17
HMGA2-202ENST00000393577 CCNFP41002 786 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 CLCN7P51798 805 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 ITGA8P53708 1063 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 ITGA1P56199 1179 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 SPANXN3Q5MJ09 141 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 ATP1A1-AS1Q5TC04 95 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 HIBCHQ6NVY1 386 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-202ENST00000393577 IGDCC3Q8IVU1 814 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 SLC38A9Q8NBW4 561 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 GIMAP7Q8NHV1 300 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 CLIP3Q96DZ5 547 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 SERTAD3Q9UJW9 196 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 PIEZO2Q9H5I5 2752 aa22.33■■□□□ 1.17
HMGA2-202ENST00000393577 HAUS5O94927 633 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 MATN4O95460 622 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 FAM87AP0C7U9 286 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 ERVK-10P10266 1014 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 MAGP20916 626 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 C19orf57Q0VDD7 668 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 CUL1Q13616 776 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 KLHL38Q2WGJ6 581 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 TTLL9Q3SXZ7 439 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 HP1BP3Q5SSJ5 553 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-202ENST00000393577 BORAQ6PGQ7 559 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 SPNS2Q8IVW8 549 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 PDIK1LQ8N165 341 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 ZNF843Q8N446 348 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 RAB42Q8N4Z0 105 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 MAGEC3Q8TD91 643 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 KCNJ9Q92806 393 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 MR1Q95460 341 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 SLC22A18Q96BI1 424 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 MED8Q96G25 268 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 SNF8Q96H20 258 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 CATSPER2Q96P56 530 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 RUFY1Q96T51 708 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 NAT9Q9BTE0 207 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 ACTR5Q9H9F9 607 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-202ENST00000393577 CHMP2BQ9UQN3 213 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 KLHL20Q9Y2M5 609 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 MED16Q9Y2X0 877 aa22.32■■□□□ 1.16
HMGA2-202ENST00000393577 C21orf140B9A014 251 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 E7EQ34 232 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 SMAPO00193 183 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 HCRTR1O43613 425 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 SEC31AO94979 1220 aaKnown RBP22.31■■□□□ 1.16
HMGA2-202ENST00000393577 CASQ1P31415 396 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 GABRA4P48169 554 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 C2CD4AQ8NCU7 369 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-202ENST00000393577 DENND1AQ8TEH3 1009 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 CFAP36Q96G28 342 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 LRFN5Q96NI6 719 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 SLC7A5P2Q9GIP4 190 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 CHRNA10Q9GZZ6 450 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-202ENST00000393577 PCDHGA6Q9Y5G7 932 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 COMMD10Q9Y6G5 202 aa22.31■■□□□ 1.16
HMGA2-202ENST00000393577 ARHGEF33A8MVX0 844 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 EFCAB8A8MWE9 144 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 KLK3P07288 261 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 ELK3P41970 407 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 MRPS25P82663 173 aaKnown RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 COL9A2Q14055 689 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 ERV3-1Q14264 604 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 HIF1AQ16665 826 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 CRTC2Q53ET0 693 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 GPR135Q8IZ08 494 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 DSELQ8IZU8 1212 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 GABPB2Q8TAK5 448 aaPredicted RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 CERS2Q96G23 380 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 GPR21Q99679 349 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 WDR83Q9BRX9 315 aaKnown RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 AARSD1Q9BTE6 412 aaKnown RBP22.3■■□□□ 1.16
HMGA2-202ENST00000393577 CHST8Q9H2A9 424 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 ACTL8Q9H568 366 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 PCMTD2Q9NV79 361 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 SPATA7Q9P0W8 599 aa22.3■■□□□ 1.16
HMGA2-202ENST00000393577 COL6A6A6NMZ7 2263 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 MEN1O00255 615 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 ZNF749O43361 778 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 PSIP1O75475 530 aaKnown RBP22.29■■□□□ 1.16
HMGA2-202ENST00000393577 CREG1O75629 220 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 OR2B3O76000 313 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 PSMB5P28074 263 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 RORAP35398 523 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 ARL4CP56559 192 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 ETF1P62495 437 aaKnown RBP22.29■■□□□ 1.16
HMGA2-202ENST00000393577 SF1Q15637 639 aaKnown RBP22.29■■□□□ 1.16
HMGA2-202ENST00000393577 DEFB109BQ30KR1 87 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 LCN10Q6JVE6 187 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 SYT10Q6XYQ8 523 aa22.29■■□□□ 1.16
HMGA2-202ENST00000393577 ZNF517Q6ZMY9 492 aaPredicted RBP22.29■■□□□ 1.16
HMGA2-202ENST00000393577 DNAJC22Q8N4W6 341 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms