RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 COMMD4Q9H0A8 199 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 MRPS30Q9NP92 439 aaKnown RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 TUBA8Q9NY65 449 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-202ENST00000380518 SPATA7Q9P0W8 599 aa15.72■□□□□ 0.11
COL2A1-202ENST00000380518 CLIC1O00299 241 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 DDX6P26196 483 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL2A1-202ENST00000380518 MPIP34949 423 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 SCARB2Q14108 478 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 PGBD2Q6P3X8 592 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 PRR23BQ6ZRT6 265 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 LRRC70Q7Z2Q7 622 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 C9orf43Q8TAL5 461 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-202ENST00000380518 MINDY3Q9H8M7 445 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 AHSGP02765 367 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 PPP3R1P63098 170 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 SLC18A2Q05940 514 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 SLBPQ14493 270 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL2A1-202ENST00000380518 LRRC73Q5JTD7 316 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 FRG2Q64ET8 278 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 MCEMP1Q8IX19 187 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 FAM210AQ96ND0 272 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 FRG2BQ96QU4 278 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 OAZ3Q9UMX2 235 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 EFCAB9A8MZ26 197 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 ORC5O43913 435 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 KCNA5P22460 613 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 S100A1P23297 94 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 FOXM1Q08050 763 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 DSC3Q14574 896 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 PAFAH1B3Q15102 231 aaKnown RBP15.71■□□□□ 0.11
COL2A1-202ENST00000380518 FAM110BQ8TC76 370 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 GKN1Q9NS71 199 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 PFDN2Q9UHV9 154 aa15.71■□□□□ 0.11
COL2A1-202ENST00000380518 SEMG2Q02383 582 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 SWI5Q1ZZU3 235 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 RBM48Q5RL73 367 aaKnown RBP15.71■□□□□ 0.1
COL2A1-202ENST00000380518 GDPD4Q6W3E5 623 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 ATP6V1C2Q8NEY4 427 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 GPR151Q8TDV0 419 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 SLC22A18Q96BI1 424 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 SLC29A3Q9BZD2 475 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 GPR88Q9GZN0 384 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 PLEKHA1Q9HB21 404 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 ADAP2Q9NPF8 381 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 GDAP2Q9NXN4 497 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 GALPQ9UBC7 116 aa15.71■□□□□ 0.1
COL2A1-202ENST00000380518 FABP12A6NFH5 140 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 RHPN2P1A8MT19 583 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 C8BP07358 591 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 CSNK2A2P19784 350 aaPredicted RBP15.7■□□□□ 0.1
COL2A1-202ENST00000380518 MAT2AP31153 395 aaKnown RBP15.7■□□□□ 0.1
COL2A1-202ENST00000380518 DNAJA1P31689 397 aaKnown RBP15.7■□□□□ 0.1
COL2A1-202ENST00000380518 CCR8P51685 355 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 RAB2AP61019 212 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 RBBP4Q09028 425 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 CARTPTQ16568 116 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 ADGRG6Q86SQ4 1221 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SIX5Q8N196 739 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 FATE1Q969F0 183 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 BHLHE41Q9C0J9 482 aaPredicted RBP15.7■□□□□ 0.1
COL2A1-202ENST00000380518 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SMOC2Q9H3U7 446 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 STOML2Q9UJZ1 356 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 PRKAB1Q9Y478 270 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 YIPF1Q9Y548 306 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 MYOM1P52179 1685 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 CYP11A1P05108 521 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 AOC1P19801 751 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 NCBP2P52298 156 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL2A1-202ENST00000380518 OGDHQ02218 1023 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 ZNF33AQ06730 810 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SLC13A2Q13183 592 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 MADCAM1Q13477 382 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 LYSMD3Q7Z3D4 306 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 NUS1Q96E22 293 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 HMGN1P05114 100 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 CRB2Q5IJ48 1285 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 IL12RB2Q99665 862 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SNTG1Q9NSN8 517 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 MOCS1Q9NZB8 636 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 COPS7AQ9UBW8 275 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 GRIP1Q9Y3R0 1128 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 DAPL1A0PJW8 107 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SLC22A1O15245 554 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 KCNE1P15382 129 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 ITGA3P26006 1051 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 PRMT2P55345 433 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SPIN4Q56A73 249 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SH3D19Q5HYK7 790 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 HFE2Q6ZVN8 426 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 COL21A1Q96P44 957 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 SLC38A3Q99624 504 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 ELOVL2Q9NXB9 296 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 HS3ST4Q9Y661 456 aa15.7■□□□□ 0.1
COL2A1-202ENST00000380518 A0A0U1RQF3 1178 aa15.69■□□□□ 0.1
COL2A1-202ENST00000380518 GMFGO60234 142 aa15.69■□□□□ 0.1
COL2A1-202ENST00000380518 IL12BP29460 328 aa15.69■□□□□ 0.1
COL2A1-202ENST00000380518 GNALP38405 381 aa15.69■□□□□ 0.1
COL2A1-202ENST00000380518 RAB15P59190 212 aa15.69■□□□□ 0.1
COL2A1-202ENST00000380518 GALNT2Q10471 571 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms