RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LYSMD3Q7Z3D4 306 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SLC15A3Q8IY34 581 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CENPSQ8N2Z9 138 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SCAIQ8N9R8 606 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 KAT2AQ92830 837 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 RFKQ969G6 155 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 NSUN3Q9H649 340 aaKnown RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 AKAP7Q9P0M2 348 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 GSAPA4D1B5 854 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 PIRO00625 290 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 STX16O14662 325 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ACOX3O15254 700 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 DIRAS1O95057 198 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 EOMESO95936 686 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 EPOP01588 193 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 IFNA16P05015 189 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CASP9P55211 416 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 KCNAB2Q13303 367 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SERINC3Q13530 473 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 PTPRCAPQ14761 206 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ADGRF1Q5T601 910 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 FAM46CQ5VWP2 391 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SUSD3Q96L08 255 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 IL4I1Q96RQ9 567 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 TXNRD2Q9NNW7 524 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SLC27A6Q9Y2P4 619 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 LOC730098B7Z3J9 87 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 ZW10O43264 779 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 PCDH7O60245 1069 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 OPN1SWP03999 348 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 OR2B6P58173 313 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TPRG1LQ5T0D9 272 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 NEK5Q6P3R8 708 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TNFAIP8L2Q6P589 184 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 SRFBP1Q8NEF9 429 aaKnown RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 ACDQ96AP0 544 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 PYURFQ96I23 114 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 MED28Q9H204 178 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 SOX17Q9H6I2 414 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TBC1D17Q9HA65 648 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GKN1Q9NS71 199 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 RPL36Q9Y3U8 105 aaKnown RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GJA8P48165 433 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TARDBPQ13148 414 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 SF1Q15637 639 aaKnown RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TMEM199Q8N511 208 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GRPEL2Q8TAA5 225 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 RTP4Q96DX8 246 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 RDH12Q96NR8 316 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 KCNC2Q96PR1 638 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GMLQ99445 158 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 ITPAQ9BY32 194 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 FZD4Q9ULV1 537 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 MYO18AQ92614 2054 aaKnown RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 DCLK1O15075 740 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 CNTN5O94779 1100 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 ALPIP09923 528 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 OMPP47874 163 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GMFBP60983 142 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 RAB39AQ14964 217 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 TMEM220Q6QAJ8 160 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GOLGA7Q7Z5G4 137 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 GJD3Q8N144 294 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 OR8H1Q8NGG4 311 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 SLC9A6Q92581 669 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF641Q96N77 438 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-203ENST00000375274 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
PTCH1-203ENST00000375274 A0A1W2PRB8 838 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 FAM92AA1XBS5 289 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ORC5O43913 435 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TPST2O60704 377 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TSPAN9O75954 239 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SELPP16109 830 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CD247P20963 164 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SLC15A1P46059 708 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 LEPRP48357 1165 aaKnown RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 RORCP51449 518 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 AP1S2P56377 157 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TUBA1BP68363 451 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 E2F2Q14209 437 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PLA2G4EQ3MJ16 856 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 RGMBQ6NW40 437 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 B3GNT9Q6UX72 402 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CHPFQ8IZ52 775 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ZBTB8BQ8NAP8 495 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 FAM98AQ8NCA5 519 aaKnown RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 MAPK15Q8TD08 544 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 GATA6Q92908 595 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CLIP3Q96DZ5 547 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 MYOCQ99972 504 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms