RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RAD51AP1Q96B01 352 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 TCTN2Q96GX1 697 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 FOPNLQ96NB1 174 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 FAM167BQ9BTA0 163 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 SLC39A10Q9ULF5 831 aa22.15■■□□□ 1.14
LSM4-201ENST00000252816 SNRNP200O75643 2136 aaKnown RBP22.15■■□□□ 1.14
LSM4-201ENST00000252816 MAP3K7O43318 606 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 PRKAR1AP10644 381 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 CASQ1P31415 396 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 ELK3P41970 407 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 GABRA4P48169 554 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 GPS2Q13227 327 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 KLHL38Q2WGJ6 581 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 DEFB110Q30KQ9 67 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 SPANXN3Q5MJ09 141 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 FAM199XQ6PEV8 388 aaPredicted RBP22.14■■□□□ 1.13
LSM4-201ENST00000252816 TTC23LQ6PF05 361 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 SYT10Q6XYQ8 523 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 PDIK1LQ8N165 341 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 C2CD4AQ8NCU7 369 aaPredicted RBP22.14■■□□□ 1.13
LSM4-201ENST00000252816 DENND1AQ8TEH3 1009 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 KCNJ9Q92806 393 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 SNF8Q96H20 258 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 RUFY1Q96T51 708 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 NAT9Q9BTE0 207 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 CHRNA10Q9GZZ6 450 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 CCDC68Q9H2F9 335 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 KLHL20Q9Y2M5 609 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 PCDHB3Q9Y5E6 796 aa22.14■■□□□ 1.13
LSM4-201ENST00000252816 PRICKLE3O43900 615 aaPredicted RBP22.13■■□□□ 1.13
LSM4-201ENST00000252816 TCN2P20062 427 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 GABRB3P28472 473 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 CCNFP41002 786 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 RPL21P46778 160 aaKnown RBP22.13■■□□□ 1.13
LSM4-201ENST00000252816 CDC20Q12834 499 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 DNASE1L3Q13609 305 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 CUL1Q13616 776 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.13■■□□□ 1.13
LSM4-201ENST00000252816 ATP1A1-AS1Q5TC04 95 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 SPATA4Q8NEY3 305 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 CFAP36Q96G28 342 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 GPR21Q99679 349 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 AARSD1Q9BTE6 412 aaKnown RBP22.13■■□□□ 1.13
LSM4-201ENST00000252816 RAB11FIP5Q9BXF6 653 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 KLHL42Q9P2K6 505 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 CHMP2BQ9UQN3 213 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 SNX24Q9Y343 169 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 MRFAP1Q9Y605 127 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 TEX264Q9Y6I9 313 aa22.13■■□□□ 1.13
LSM4-201ENST00000252816 BOD1L1Q8NFC6 3051 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 ARHGEF33A8MVX0 844 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 EFCAB8A8MWE9 144 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 H3BMH7 237 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 SMAPO00193 183 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 KATNA1O75449 491 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 CTSBP07858 339 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 MAGP20916 626 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 OAS2P29728 719 aaKnown RBP22.12■■□□□ 1.13
LSM4-201ENST00000252816 ITGA1P56199 1179 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 HIF1AQ16665 826 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 CNTN4Q8IWV2 1026 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 SLC17A6Q9P2U8 582 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 SERTAD3Q9UJW9 196 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 DHRS7Q9Y394 339 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 PCDHGA6Q9Y5G7 932 aa22.12■■□□□ 1.13
LSM4-201ENST00000252816 PSIP1O75475 530 aaKnown RBP22.11■■□□□ 1.13
LSM4-201ENST00000252816 FAM87AP0C7U9 286 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 CYP2A7P20853 494 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 RORAP35398 523 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 ARL4CP56559 192 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 TIAL1Q01085 375 aaKnown RBP eCLIP22.11■■□□□ 1.13
LSM4-201ENST00000252816 TTLL9Q3SXZ7 439 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 STEAP4Q687X5 459 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 LCN10Q6JVE6 187 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 C16orf46Q6P387 395 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 TRMT10BQ6PF06 316 aaKnown RBP22.11■■□□□ 1.13
LSM4-201ENST00000252816 ZNF517Q6ZMY9 492 aaPredicted RBP22.11■■□□□ 1.13
LSM4-201ENST00000252816 NEK10Q6ZWH5 1172 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 DSELQ8IZU8 1212 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 DNAJC22Q8N4W6 341 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 HMGCLL1Q8TB92 370 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 CD200R1Q8TD46 325 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 INPP5DQ92835 1189 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 MR1Q95460 341 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 SLC22A18Q96BI1 424 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 CERS2Q96G23 380 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 LRFN5Q96NI6 719 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 NDNQ99608 321 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 ACTR5Q9H9F9 607 aaPredicted RBP22.11■■□□□ 1.13
LSM4-201ENST00000252816 ZC3H7BQ9UGR2 993 aaKnown RBP22.11■■□□□ 1.13
LSM4-201ENST00000252816 KCND3Q9UK17 655 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 COMMD10Q9Y6G5 202 aa22.11■■□□□ 1.13
LSM4-201ENST00000252816 C21orf140B9A014 251 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 E7EQ34 232 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 MEN1O00255 615 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 ZNF749O43361 778 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 PSMB5P28074 263 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 CARSP49589 748 aaKnown RBP22.1■■□□□ 1.13
LSM4-201ENST00000252816 MC1RQ01726 317 aa22.1■■□□□ 1.13
LSM4-201ENST00000252816 C2orf54Q08AI8 447 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms