RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Pcmtd2Q8BHD8 359 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fam221bQ8C627 487 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rmnd1Q8CI78 450 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dedd2Q8QZV0 330 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Neto1Q8R4I7 533 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Akr1c20Q8VC77 323 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Epsti1Q8VDI1 314 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rab7bQ8VEA8 199 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rab14Q91V41 215 aaKnown RBP6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nrif1Q923B3 828 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Txndc12Q9CQU0 170 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Prorsd1Q9D820 169 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nt5cQ9JM14 200 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 PrepQ9QUR6 710 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zfyve26Q5DU37 2529 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 MipepA6H611 711 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vwa5b1A9Z1V5 1215 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr891E9Q843 316 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Bnc1O35914 961 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Lgals7O54974 136 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 P01641 117 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fcgr3P08508 261 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 ElocP83940 112 aaKnown RBP6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Serping1P97290 504 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Bcl2a1Q07440 172 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nfatc2Q60591 927 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Runx1t1Q61909 577 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ino80dQ66JY2 873 aaKnown RBP6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr845Q7TRG2 312 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr384Q7TRX8 312 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fbxo30Q8BJL1 746 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 AgpsQ8C0I1 645 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tspan14Q8QZY6 270 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mccc1Q99MR8 717 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 ItpaQ9D892 198 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Plscr1Q9JJ00 328 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccr10Q9JL21 362 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Atp6ap1Q9R1Q9 463 aa6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Urb1Q571H0 2274 aaKnown RBP6.75□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kif26bQ7TNC6 2112 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Igkv6-29A0A0G2JEI6 115 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r7E9PYL5 915 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sult3a2G5E904 293 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r3H3BJ88 915 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r6H3BK29 913 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Csn1s1P19228 313 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pdcd2P46718 343 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rpl5P47962 297 aaKnown RBP6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccr3P51678 359 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cd80Q00609 306 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cdk16Q04735 496 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Hsdl2Q2TPA8 490 aaKnown RBP6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Q3KNL4 93 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Arid5aQ3U108 590 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rnf43Q5NCP0 784 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Six1Q62231 284 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pced1aQ6P1Z5 449 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sec24bQ80ZX0 1251 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Arhgap22Q8BL80 702 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Znf451Q8C0P7 1056 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 N4bp2l2Q8JZS6 575 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 FlcnQ8QZS3 579 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Epm2aip1Q8VEH5 606 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr1325Q8VF43 315 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pcdhga9Q91XX9 932 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Adgre4Q91ZE5 689 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Terb2Q9D494 218 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pgam1Q9DBJ1 254 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 GmprQ9DCZ1 345 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 PrccQ9EQC8 491 aaKnown RBP6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 VcanQ62059 3357 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cacna1cQ01815 2139 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Erich1E9PY43 332 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fbrsl1E9Q9T0 1031 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zfp715G3X9T1 886 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sgo2bJ3QMK1 1167 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ebf2O08792 575 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ifnar2O35664 513 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fcgr2P08101 330 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tgfb3P17125 410 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 CblP22682 913 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Elk4P41158 430 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 GsrP47791 500 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cpne9Q1RLL3 553 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gstt2Q61133 244 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Itih1Q61702 907 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Dusp23Q6NT99 150 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Olfr735Q7TRM4 354 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gtf3c4Q8BMQ2 817 aaKnown RBP6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tmco6Q8BQX5 494 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gpr26Q8BZA7 337 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Trim31Q8R0K2 507 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Sirt3Q8R104 334 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mthfd1Q922D8 935 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Psmg2Q9EST4 264 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ca5bQ9QZA0 317 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Fhl5Q9WTX7 284 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Phf11A6H5X4 337 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mpig6bD7PDD4 242 aa6.74□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Apol11bE9PUZ0 337 aa6.74□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms