RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Snx8Q8CFD4 459 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ahsa2Q8N9S3 331 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 ClmpQ8R373 373 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gjd3Q91YD1 278 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mospd2Q9CWP6 518 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cdkn2aipnlQ9D211 116 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rnf128Q9D304 428 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Il17rbQ9JIP3 499 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Scn9aQ62205 1984 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mfsd13bA0A1L1SUA2 455 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mup18A2BIM8 181 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Zfp952B0V2W4 504 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Sult2a6B2RVI8 285 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fignl2J3QK54 644 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fam181aJ3QNB7 292 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cbx4O55187 551 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mup11P04938 181 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Nat1P50294 290 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm21320Q4FZE8 181 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Dalrd3Q6PJN8 538 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Crls1Q80ZM8 303 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mterf2Q8BKY8 385 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ing4Q8C0D7 249 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 SynpoQ8CC35 929 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Clp1Q99LI9 425 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tex13bQ99MW5 186 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Wdr55Q9CX97 388 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Btnl6A2CG22 539 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Aldh1a7O35945 501 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Per3O70361 1113 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 P01650 108 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 P01653 108 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Il1rnP25085 178 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gna12P27600 379 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Arhgap39P59281 1107 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Lman2lP59481 347 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 MtpnP62774 118 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mc1rQ01727 315 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pdcd4Q61823 469 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr1313Q7TQW8 311 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Insig1Q8BGI3 259 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fut11Q8BHC9 489 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Nup54Q8BTS4 510 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Piwil2Q8CDG1 971 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pbdc1Q9D0B6 198 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tmem53Q9D0Z3 276 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Exosc1Q9DAA6 195 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Smg9Q9DB90 520 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 HnrnpdlQ9Z130 301 aaKnown RBP9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc23a1Q9Z2J0 605 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Elf4Q9Z2U4 655 aa9.74□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Myh10Q61879 1976 aaKnown RBP9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 NesQ6P5H2 1864 aaKnown RBP9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm20911A0A087WSS0 222 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm45713A0A1B0GS68 446 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm14459A2BI73 179 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Dcpp2E9PYC2 171 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Dcpp1L7N1X9 171 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm8374L7N2A9 172 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 NmbrO54799 390 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Hoxb6P09023 224 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gna13P27601 377 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Agtr2P35374 363 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Stx4P70452 298 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 StacP97306 403 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 SirpaP97797 513 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Nol9Q3TZX8 714 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 A630001G21RikQ3UTB2 229 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fam46cQ5SSF7 391 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr1080Q7TR67 313 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 DglucyQ8BH86 617 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fbxo30Q8BJL1 746 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc17a6Q8BLE7 582 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Prkd3Q8K1Y2 889 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr1311Q8VET0 312 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pcdhga11Q91XY8 933 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pcdhb4Q91XZ6 784 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Diras1Q91Z61 198 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Exosc4Q921I9 245 aaKnown RBP9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Trappc5Q9CQA1 188 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Exoc2Q9D4H1 924 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 H2bfmQ9DAB5 224 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ccr10Q9JL21 362 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tyw5A2RSX7 315 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr742A2RTP5 311 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm16494E9Q2Z4 87 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr171G5E8J1 314 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tpst2O88856 376 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cdh1P09803 884 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ldb1P70662 411 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tgm3Q08189 693 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Elf3Q3UPW2 391 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Pkp4Q68FH0 1190 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 AtminQ6P9S1 818 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Klhl6Q6V595 619 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ubap2lQ80X50 1107 aaKnown RBP9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Igsf8Q8R366 611 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cant1Q8VCF1 403 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr342Q8VGK7 312 aa9.73□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Acsm1Q91VA0 573 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms