RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YGR153WP48238 217 aa17.62■□□□□ 0.41
TRN1tP(UGG)A ORC4P54791 529 aa17.62■□□□□ 0.41
TRN1tP(UGG)A PTA1Q01329 785 aaPredicted RBP17.62■□□□□ 0.41
TRN1tP(UGG)A MFM1Q02783 413 aa17.62■□□□□ 0.41
TRN1tP(UGG)A TY1B-AO13527 1196 aaKnown RBP17.61■□□□□ 0.41
TRN1tP(UGG)A TKL1P23254 680 aaKnown RBP17.61■□□□□ 0.41
TRN1tP(UGG)A ISW1P38144 1129 aa17.61■□□□□ 0.41
TRN1tP(UGG)A VPS29P38759 282 aa17.61■□□□□ 0.41
TRN1tP(UGG)A WHI4Q07655 649 aaKnown RBP17.61■□□□□ 0.41
TRN1tP(UGG)A ISA1Q07821 250 aaPredicted RBP17.61■□□□□ 0.41
TRN1tP(UGG)A ELM1P32801 640 aa17.6■□□□□ 0.41
TRN1tP(UGG)A RFT1P38206 574 aaPredicted RBP17.6■□□□□ 0.41
TRN1tP(UGG)A REG2P38232 338 aa17.6■□□□□ 0.41
TRN1tP(UGG)A MMR1Q06324 491 aa17.6■□□□□ 0.41
TRN1tP(UGG)A APC11Q12157 165 aa17.6■□□□□ 0.41
TRN1tP(UGG)A MCM3P24279 971 aaKnown RBP17.59■□□□□ 0.41
TRN1tP(UGG)A YLH47Q06493 454 aa17.59■□□□□ 0.41
TRN1tP(UGG)A MCM4P30665 933 aaKnown RBP17.58■□□□□ 0.4
TRN1tP(UGG)A RGT1P32862 1170 aa17.58■□□□□ 0.4
TRN1tP(UGG)A YGL039WP53183 348 aaKnown RBP17.58■□□□□ 0.4
TRN1tP(UGG)A MET7Q08645 548 aa17.58■□□□□ 0.4
TRN1tP(UGG)A HIS4P00815 799 aaKnown RBP17.57■□□□□ 0.4
TRN1tP(UGG)A YDR461C-AQ2V2P7 80 aa17.57■□□□□ 0.4
TRN1tP(UGG)A AIM44Q99299 758 aa17.57■□□□□ 0.4
TRN1tP(UGG)A PRE10P21242 288 aaKnown RBP RIP-Chip data17.56■□□□□ 0.4not detected
TRN1tP(UGG)A CLB5P30283 435 aa17.56■□□□□ 0.4
TRN1tP(UGG)A DID4P36108 232 aa17.56■□□□□ 0.4
TRN1tP(UGG)A RVS167P39743 482 aaKnown RBP17.56■□□□□ 0.4
TRN1tP(UGG)A MXR1P40029 184 aa17.56■□□□□ 0.4
TRN1tP(UGG)A CUE3P53137 624 aaKnown RBP17.56■□□□□ 0.4
TRN1tP(UGG)A MSC6Q08818 692 aaKnown RBP17.56■□□□□ 0.4
TRN1tP(UGG)A DDP1Q99321 188 aaKnown RBP17.56■□□□□ 0.4
TRN1tP(UGG)A SEC8P32855 1065 aa17.55■□□□□ 0.4
TRN1tP(UGG)A UBP11P36026 717 aa17.55■□□□□ 0.4
TRN1tP(UGG)A RSM25P40496 264 aa17.55■□□□□ 0.4
TRN1tP(UGG)A HUL5P53119 910 aa17.55■□□□□ 0.4
TRN1tP(UGG)A SMC6Q12749 1114 aa17.55■□□□□ 0.4
TRN1tP(UGG)A ESS1P22696 170 aa17.54■□□□□ 0.4
TRN1tP(UGG)A ROX1P25042 368 aa17.54■□□□□ 0.4
TRN1tP(UGG)A TFC4P33339 1025 aa17.54■□□□□ 0.4
TRN1tP(UGG)A UBA2P52488 636 aa17.54■□□□□ 0.4
TRN1tP(UGG)A CNM67P53865 581 aaKnown RBP17.54■□□□□ 0.4
TRN1tP(UGG)A YMR321CQ04898 105 aa17.54■□□□□ 0.4
TRN1tP(UGG)A ADY4Q05955 493 aa17.54■□□□□ 0.4
TRN1tP(UGG)A PGK1P00560 416 aaKnown RBP17.53■□□□□ 0.4
TRN1tP(UGG)A YUR1P26725 428 aa17.53■□□□□ 0.4
TRN1tP(UGG)A PGM1P33401 570 aaKnown RBP17.53■□□□□ 0.4
TRN1tP(UGG)A DBP7P36120 742 aaKnown RBP17.53■□□□□ 0.4
TRN1tP(UGG)A PSF2P40359 213 aa17.53■□□□□ 0.4
TRN1tP(UGG)A DAK2P43550 591 aa17.53■□□□□ 0.4
TRN1tP(UGG)A UBP15P50101 1230 aa17.53■□□□□ 0.4
TRN1tP(UGG)A CBK1P53894 756 aa17.53■□□□□ 0.4
TRN1tP(UGG)A BMH1P29311 267 aaKnown RBP17.52■□□□□ 0.4
TRN1tP(UGG)A YER130CP39959 443 aa17.52■□□□□ 0.4
TRN1tP(UGG)A GPD2P41911 440 aaKnown RBP17.52■□□□□ 0.4
TRN1tP(UGG)A BRE2P43132 505 aa17.52■□□□□ 0.4
TRN1tP(UGG)A VPS53P47061 822 aa17.52■□□□□ 0.4
TRN1tP(UGG)A VMS1Q04311 632 aaKnown RBP17.52■□□□□ 0.4
TRN1tP(UGG)A PSR2Q07949 397 aa17.52■□□□□ 0.4
TRN1tP(UGG)A ETT1Q08421 412 aaKnown RBP17.52■□□□□ 0.4
TRN1tP(UGG)A ICL2Q12031 575 aa17.52■□□□□ 0.4
TRN1tP(UGG)A YKT6P36015 200 aaKnown RBP17.51■□□□□ 0.39
TRN1tP(UGG)A ARL1P38116 183 aaKnown RBP17.51■□□□□ 0.39
TRN1tP(UGG)A SNF7P39929 240 aaKnown RBP17.51■□□□□ 0.39
TRN1tP(UGG)A YPT11P48559 417 aa17.51■□□□□ 0.39
TRN1tP(UGG)A DIP5P53388 608 aa17.51■□□□□ 0.39
TRN1tP(UGG)A PGA2P53903 129 aa17.51■□□□□ 0.39
TRN1tP(UGG)A SVF1Q05515 481 aa17.51■□□□□ 0.39
TRN1tP(UGG)A PHM6Q05637 104 aa17.51■□□□□ 0.39
TRN1tP(UGG)A CRD1Q07560 283 aa17.51■□□□□ 0.39
TRN1tP(UGG)A GPA1P08539 472 aa17.5■□□□□ 0.39
TRN1tP(UGG)A PET10P36139 283 aa17.5■□□□□ 0.39
TRN1tP(UGG)A TRM11Q12463 433 aa17.5■□□□□ 0.39
TRN1tP(UGG)A SUP45P12385 437 aaKnown RBP17.49■□□□□ 0.39
TRN1tP(UGG)A CDC15P27636 974 aa17.49■□□□□ 0.39
TRN1tP(UGG)A ROG3P43602 733 aa17.49■□□□□ 0.39
TRN1tP(UGG)A TRS33Q99394 268 aa17.49■□□□□ 0.39
TRN1tP(UGG)A CLN3P13365 580 aa17.48■□□□□ 0.39
TRN1tP(UGG)A RPN12P32496 274 aa17.48■□□□□ 0.39
TRN1tP(UGG)A SUV3P32580 737 aa17.48■□□□□ 0.39
TRN1tP(UGG)A SCS3P53012 380 aa17.48■□□□□ 0.39
TRN1tP(UGG)A ZPR1P53303 486 aaKnown RBP17.48■□□□□ 0.39
TRN1tP(UGG)A YEL076C-AP0CX16 216 aa17.47■□□□□ 0.39
TRN1tP(UGG)A YLR464WP0CX17 216 aa17.47■□□□□ 0.39
TRN1tP(UGG)A CKA2P19454 339 aa17.47■□□□□ 0.39
TRN1tP(UGG)A YEL076CP39971 216 aa17.47■□□□□ 0.39
TRN1tP(UGG)A THI6P41835 540 aa17.47■□□□□ 0.39
TRN1tP(UGG)A BRE5P53741 515 aaKnown RBP17.47■□□□□ 0.39
TRN1tP(UGG)A PIH1P38768 344 aa17.46■□□□□ 0.39
TRN1tP(UGG)A SRD1P09007 221 aa17.45■□□□□ 0.38
TRN1tP(UGG)A POX1P13711 748 aa17.45■□□□□ 0.38
TRN1tP(UGG)A SAC6P32599 642 aaKnown RBP17.45■□□□□ 0.38
TRN1tP(UGG)A SIP3P38717 1229 aa17.45■□□□□ 0.38
TRN1tP(UGG)A HMF1P40037 129 aaKnown RBP17.45■□□□□ 0.38
TRN1tP(UGG)A RPS7BP48164 190 aaKnown RBP17.45■□□□□ 0.38
TRN1tP(UGG)A KRE33P53914 1056 aaKnown RBP17.45■□□□□ 0.38
TRN1tP(UGG)A FOB1O13329 566 aa17.44■□□□□ 0.38
TRN1tP(UGG)A HIR1P32479 840 aa17.44■□□□□ 0.38
TRN1tP(UGG)A ULP2P40537 1034 aaPredicted RBP17.44■□□□□ 0.38
TRN1tP(UGG)A FUS2Q05670 677 aa17.44■□□□□ 0.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms