RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	HXT17	P53631	564 aa		2.54	□□□□□ -2
RLM1	YPL089C	SIW14	P53965	281 aa		2.54	□□□□□ -2
RLM1	YPL089C	HXT15	P54854	567 aa		2.54	□□□□□ -2
RLM1	YPL089C	RMD1	Q03441	430 aa		2.54	□□□□□ -2
RLM1	YPL089C	HRK1	Q08732	759 aa	Known RBP	2.54	□□□□□ -2
RLM1	YPL089C	RPS13	P05756	151 aa	Known RBP	2.54	□□□□□ -2
RLM1	YPL089C	PRO1	P32264	428 aa		2.54	□□□□□ -2
RLM1	YPL089C	YJL045W	P47052	634 aa		2.54	□□□□□ -2
RLM1	YPL089C	MSE1	P48525	536 aa		2.54	□□□□□ -2
RLM1	YPL089C	OYE2	Q03558	400 aa	Known RBP	2.54	□□□□□ -2
RLM1	YPL089C	ESF1	Q06344	628 aa	Known RBP	2.54	□□□□□ -2
RLM1	YPL089C	LPX1	Q12405	387 aa	Known RBP	2.54	□□□□□ -2
RLM1	YPL089C	PTC5	Q12511	572 aa		2.54	□□□□□ -2
RLM1	YPL089C	DED1	P06634	604 aa	Known RBP	2.53	□□□□□ -2
RLM1	YPL089C	KIP1	P28742	1111 aa		2.53	□□□□□ -2
RLM1	YPL089C	MDL2	P33311	773 aa		2.53	□□□□□ -2
RLM1	YPL089C	ROD1	Q02805	837 aa		2.53	□□□□□ -2
RLM1	YPL089C	SRO9	P25567	434 aa	Known RBP	2.52	□□□□□ -2.01
RLM1	YPL089C	MKK2	P32491	506 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	PEP7	P32609	515 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	YSC84	P32793	468 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	ALG3	P38179	458 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	YHL012W	P38709	493 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	PTC7	P38797	343 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
RLM1	YPL089C	RAT1	Q02792	1006 aa	Known RBP	2.52	□□□□□ -2.01
RLM1	YPL089C	BDF2	Q07442	638 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	GTS1	P40956	396 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	MRL1	Q06815	381 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	RTT10	Q08924	1013 aa		2.52	□□□□□ -2.01
RLM1	YPL089C	SYP1	P25623	870 aa	Known RBP	2.51	□□□□□ -2.01
RLM1	YPL089C	BAP2	P38084	609 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	HOS3	Q02959	697 aa	Known RBP	2.51	□□□□□ -2.01
RLM1	YPL089C	SVF1	Q05515	481 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	RCL1	Q08096	367 aa	Predicted RBP	2.51	□□□□□ -2.01
RLM1	YPL089C	YPL260W	Q08977	551 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	DUT1	P33317	147 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	RER2	P35196	286 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	GPB2	P39717	880 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	RPN3	P40016	523 aa	Known RBP	2.51	□□□□□ -2.01
RLM1	YPL089C	RSC58	Q07979	502 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	TMA46	Q12000	345 aa	Known RBP	2.51	□□□□□ -2.01
RLM1	YPL089C	YDL177C	Q12257	170 aa		2.51	□□□□□ -2.01
RLM1	YPL089C	SNF5	P18480	905 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	DBP5	P20449	482 aa	Known RBP	2.5	□□□□□ -2.01
RLM1	YPL089C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.5	□□□□□ -2.01	not detected
RLM1	YPL089C	RAD53	P22216	821 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	RAD27	P26793	382 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	MNR2	P35724	969 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	RGD1	P38339	666 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	CNN1	P43618	361 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	TNA1	P53322	534 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	SPO21	Q12411	609 aa		2.5	□□□□□ -2.01
RLM1	YPL089C	COQ4	O13525	335 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	CDC34	P14682	295 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	MLS1	P30952	554 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	PIK1	P39104	1066 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	MPH1	P40562	993 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	JIP5	Q06214	492 aa	Predicted RBP	2.49	□□□□□ -2.01
RLM1	YPL089C	YER152C	P10356	443 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	AIM26	P32858	118 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	PET112	P33893	541 aa		2.49	□□□□□ -2.01
RLM1	YPL089C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.49	□□□□□ -2.01	RIP-Chip
RLM1	YPL089C	TIF35	Q04067	274 aa	Known RBP	2.49	□□□□□ -2.01
RLM1	YPL089C	NBA1	Q08229	501 aa	Known RBP	2.49	□□□□□ -2.01
RLM1	YPL089C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.48	□□□□□ -2.01	not detected
RLM1	YPL089C	CCZ1	P38273	704 aa		2.48	□□□□□ -2.01
RLM1	YPL089C	OCA5	P38738	679 aa		2.48	□□□□□ -2.01
RLM1	YPL089C	ETP1	P38748	585 aa	Known RBP	2.48	□□□□□ -2.01
RLM1	YPL089C	FOL2	P51601	243 aa	Known RBP	2.48	□□□□□ -2.01
RLM1	YPL089C	SNO2	P53823	222 aa		2.48	□□□□□ -2.01
RLM1	YPL089C	EEB1	Q02891	456 aa		2.48	□□□□□ -2.01
RLM1	YPL089C	URN1	Q06525	465 aa	Known RBP	2.48	□□□□□ -2.01
RLM1	YPL089C	SPS1	P08458	490 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	LYP1	P32487	611 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	SEC26	P41810	973 aa	Known RBP	2.47	□□□□□ -2.01
RLM1	YPL089C	HNT2	P49775	206 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	YGR053C	P53234	283 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	CTF4	Q01454	927 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.47	□□□□□ -2.01	not detected
RLM1	YPL089C	TRP2	P00899	507 aa	Known RBP	2.47	□□□□□ -2.01
RLM1	YPL089C	NAP1	P25293	417 aa	Known RBP	2.47	□□□□□ -2.01
RLM1	YPL089C	TAT2	P38967	592 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	YFL054C	P43549	646 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	NNF1	P47149	201 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	ENV11	P53246	860 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	SLI1	P53304	468 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	GNT1	Q12096	491 aa		2.47	□□□□□ -2.01
RLM1	YPL089C	YTA7	P40340	1379 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	TYW3	P53177	273 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	RSB1	Q08417	382 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	RPL11A	P0C0W9	174 aa	Known RBP	2.46	□□□□□ -2.02
RLM1	YPL089C	INO1	P11986	533 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	DBP2	P24783	546 aa	Known RBP	2.46	□□□□□ -2.02
RLM1	YPL089C	MCM7	P38132	845 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	PNT1	P38969	423 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	MXR1	P40029	184 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	PIN2	Q12057	282 aa		2.46	□□□□□ -2.02
RLM1	YPL089C	RPL11B	Q3E757	174 aa	Predicted RBP	2.46	□□□□□ -2.02
RLM1	YPL089C	CLN2	P20438	545 aa		2.45	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 337.4 ms