RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W CDC34P14682 295 aa7.14□□□□□ -1.27
VAM3YOR106W PUF4P25339 888 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
VAM3YOR106W MLS1P30952 554 aa7.14□□□□□ -1.27
VAM3YOR106W RER2P35196 286 aa7.14□□□□□ -1.27
VAM3YOR106W RPN3P40016 523 aaKnown RBP7.14□□□□□ -1.27
VAM3YOR106W MCM7P38132 845 aa7.13□□□□□ -1.27
VAM3YOR106W HNT2P49775 206 aa7.13□□□□□ -1.27
VAM3YOR106W SNU71P53207 620 aaKnown RBP7.13□□□□□ -1.27
VAM3YOR106W SVF1Q05515 481 aa7.13□□□□□ -1.27
VAM3YOR106W RSC58Q07979 502 aa7.13□□□□□ -1.27
VAM3YOR106W CLN2P20438 545 aa7.12□□□□□ -1.27
VAM3YOR106W SEG2P34250 1132 aa7.12□□□□□ -1.27
VAM3YOR106W AOS1Q06624 347 aa7.12□□□□□ -1.27
VAM3YOR106W RSB1Q08417 382 aa7.12□□□□□ -1.27
VAM3YOR106W DUT1P33317 147 aa7.11□□□□□ -1.27
VAM3YOR106W IRC24P40580 263 aa7.11□□□□□ -1.27
VAM3YOR106W TIF35Q04067 274 aaKnown RBP7.11□□□□□ -1.27
VAM3YOR106W SPS1P08458 490 aa7.1□□□□□ -1.27
VAM3YOR106W ELM1P32801 640 aa7.1□□□□□ -1.27
VAM3YOR106W BAP2P38084 609 aa7.1□□□□□ -1.27
VAM3YOR106W PIK1P39104 1066 aa7.1□□□□□ -1.27
VAM3YOR106W MET10P39692 1035 aa7.1□□□□□ -1.27
VAM3YOR106W MAD1P40957 749 aa7.1□□□□□ -1.27
VAM3YOR106W PRP43P53131 767 aaKnown RBP7.1□□□□□ -1.27
VAM3YOR106W RCL1Q08096 367 aaPredicted RBP7.1□□□□□ -1.27
VAM3YOR106W TRP2P00899 507 aaKnown RBP7.09□□□□□ -1.27
VAM3YOR106W LYP1P32487 611 aa7.09□□□□□ -1.27
VAM3YOR106W MPH1P40562 993 aa7.09□□□□□ -1.27
VAM3YOR106W TYW3P53177 273 aa7.09□□□□□ -1.27
VAM3YOR106W JIP5Q06214 492 aaPredicted RBP7.09□□□□□ -1.27
VAM3YOR106W YER152CP10356 443 aa7.08□□□□□ -1.28
VAM3YOR106W GAS1P22146 559 aaKnown RBP7.08□□□□□ -1.28
VAM3YOR106W ETP1P38748 585 aaKnown RBP7.08□□□□□ -1.28
VAM3YOR106W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
VAM3YOR106W SNF5P18480 905 aa7.07□□□□□ -1.28
VAM3YOR106W NIT1P40447 199 aa7.07□□□□□ -1.28
VAM3YOR106W EEB1Q02891 456 aa7.07□□□□□ -1.28
VAM3YOR106W SPO20Q04359 397 aa7.07□□□□□ -1.28
VAM3YOR106W GNT1Q12096 491 aa7.07□□□□□ -1.28
VAM3YOR106W ENV11P53246 860 aa7.06□□□□□ -1.28
VAM3YOR106W CWC24P53769 259 aa7.06□□□□□ -1.28
VAM3YOR106W INO1P11986 533 aa7.05□□□□□ -1.28
VAM3YOR106W RNQ1P25367 405 aa7.05□□□□□ -1.28
VAM3YOR106W GDE1Q02979 1223 aa7.05□□□□□ -1.28
VAM3YOR106W MOT2P34909 587 aaKnown RBP7.04□□□□□ -1.28
VAM3YOR106W SEC26P41810 973 aaKnown RBP7.04□□□□□ -1.28
VAM3YOR106W FAA4P47912 694 aaKnown RBP7.04□□□□□ -1.28
VAM3YOR106W PIN2Q12057 282 aa7.04□□□□□ -1.28
VAM3YOR106W RKM4Q12504 494 aa7.04□□□□□ -1.28
VAM3YOR106W SNF7P39929 240 aaKnown RBP7.03□□□□□ -1.28
VAM3YOR106W YFL054CP43549 646 aa7.03□□□□□ -1.28
VAM3YOR106W MRPL22P53881 309 aa7.03□□□□□ -1.28
VAM3YOR106W VPS16Q03308 798 aa7.03□□□□□ -1.28
VAM3YOR106W SPP382Q06411 708 aaPredicted RBP7.03□□□□□ -1.28
VAM3YOR106W YDL177CQ12257 170 aa7.03□□□□□ -1.28
VAM3YOR106W BAS1P22035 811 aa7.02□□□□□ -1.29
VAM3YOR106W YKL107WP34251 309 aa7.02□□□□□ -1.29
VAM3YOR106W KRI1P42846 591 aaKnown RBP7.02□□□□□ -1.29
VAM3YOR106W YGR053CP53234 283 aa7.02□□□□□ -1.29
VAM3YOR106W SNO2P53823 222 aa7.02□□□□□ -1.29
VAM3YOR106W YOR352WQ08816 343 aa7.02□□□□□ -1.29
VAM3YOR106W CDA2Q06703 312 aa7.01□□□□□ -1.29
VAM3YOR106W ACM1Q08981 209 aa7.01□□□□□ -1.29
VAM3YOR106W RPL11AP0C0W9 174 aaKnown RBP7□□□□□ -1.29
VAM3YOR106W RFC5P38251 354 aa7□□□□□ -1.29
VAM3YOR106W MXR1P40029 184 aa7□□□□□ -1.29
VAM3YOR106W YGL176CP46945 554 aa7□□□□□ -1.29
VAM3YOR106W YLR225CQ05948 407 aaKnown RBP7□□□□□ -1.29
VAM3YOR106W FAL1Q12099 399 aaKnown RBP7□□□□□ -1.29
VAM3YOR106W RPL11BQ3E757 174 aaPredicted RBP7□□□□□ -1.29
VAM3YOR106W TSA1P34760 196 aaKnown RBP6.99□□□□□ -1.29
VAM3YOR106W UGA2P38067 497 aa6.99□□□□□ -1.29
VAM3YOR106W SVS1Q12254 260 aa6.99□□□□□ -1.29
VAM3YOR106W GEM1P39722 662 aa6.98□□□□□ -1.29
VAM3YOR106W UBP5P39944 805 aa6.98□□□□□ -1.29
VAM3YOR106W RSM24Q03976 319 aa6.98□□□□□ -1.29
VAM3YOR106W YPL066WQ12194 479 aa6.98□□□□□ -1.29
VAM3YOR106W THS1P04801 734 aaKnown RBP6.96□□□□□ -1.3
VAM3YOR106W KIN2P13186 1147 aaKnown RBP6.96□□□□□ -1.3
VAM3YOR106W ABD1P32783 436 aaPredicted RBP6.96□□□□□ -1.3
VAM3YOR106W PIN4P34217 668 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
VAM3YOR106W PAM1P37304 830 aaKnown RBP6.96□□□□□ -1.3
VAM3YOR106W AIM3P38266 947 aaKnown RBP6.96□□□□□ -1.3
VAM3YOR106W PNT1P38969 423 aa6.96□□□□□ -1.3
VAM3YOR106W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
VAM3YOR106W CYC1P00044 109 aaPredicted RBP6.95□□□□□ -1.3
VAM3YOR106W DBP2P24783 546 aaKnown RBP6.95□□□□□ -1.3
VAM3YOR106W VAC8P39968 578 aa6.95□□□□□ -1.3
VAM3YOR106W ESC2Q06340 456 aa6.95□□□□□ -1.3
VAM3YOR106W APL1P27351 700 aa6.94□□□□□ -1.3
VAM3YOR106W SLA2P33338 968 aa6.94□□□□□ -1.3
VAM3YOR106W ALD6P54115 500 aaKnown RBP6.94□□□□□ -1.3
VAM3YOR106W SGD1Q06132 899 aa6.94□□□□□ -1.3
VAM3YOR106W ATG13Q06628 738 aa6.94□□□□□ -1.3
VAM3YOR106W BI4P03879 638 aa6.93□□□□□ -1.3
VAM3YOR106W PRP6P19735 899 aaPredicted RBP6.93□□□□□ -1.3
VAM3YOR106W SBA1P28707 216 aaKnown RBP6.93□□□□□ -1.3
VAM3YOR106W ABZ1P37254 787 aaPredicted RBP6.93□□□□□ -1.3
VAM3YOR106W RIM8P53179 542 aa6.93□□□□□ -1.3
VAM3YOR106W NOP7P53261 605 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms