RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C ARI1P53111 347 aaKnown RBP4.45□□□□□ -1.7
VHS3YOR054C YGR273CP53329 174 aa4.45□□□□□ -1.7
VHS3YOR054C YPL109CQ02981 657 aa4.45□□□□□ -1.7
VHS3YOR054C YML119WQ03208 357 aa4.45□□□□□ -1.7
VHS3YOR054C RCF1Q03713 159 aa4.45□□□□□ -1.7
VHS3YOR054C PLP1Q04004 230 aa4.45□□□□□ -1.7
VHS3YOR054C ATG26Q06321 1198 aa4.45□□□□□ -1.7
VHS3YOR054C TIF1P10081 395 aaKnown RBP4.44□□□□□ -1.7
VHS3YOR054C VAN1P23642 535 aa4.44□□□□□ -1.7
VHS3YOR054C RPN2P32565 945 aaKnown RBP4.44□□□□□ -1.7
VHS3YOR054C NPL6P32832 435 aa4.44□□□□□ -1.7
VHS3YOR054C RIB7P33312 244 aa4.44□□□□□ -1.7
VHS3YOR054C PET112P33893 541 aa4.44□□□□□ -1.7
VHS3YOR054C VPS35P34110 944 aa4.44□□□□□ -1.7
VHS3YOR054C SEG2P34250 1132 aa4.44□□□□□ -1.7
VHS3YOR054C PCS60P38137 543 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VHS3YOR054C TDA11P38854 504 aa4.44□□□□□ -1.7
VHS3YOR054C CCC2P38995 1004 aa4.44□□□□□ -1.7
VHS3YOR054C STB1P42845 420 aa4.44□□□□□ -1.7
VHS3YOR054C RBL2P48606 106 aaKnown RBP4.44□□□□□ -1.7
VHS3YOR054C ALF1P53904 254 aa4.44□□□□□ -1.7
VHS3YOR054C BOP3P53958 396 aa4.44□□□□□ -1.7
VHS3YOR054C FMP30Q02883 468 aa4.44□□□□□ -1.7
VHS3YOR054C VPS38Q05919 439 aa4.44□□□□□ -1.7
VHS3YOR054C YMR085WP0CF18 432 aa4.43□□□□□ -1.7
VHS3YOR054C ASF1P32447 279 aa4.43□□□□□ -1.7
VHS3YOR054C MAL33P38157 468 aa4.43□□□□□ -1.7
VHS3YOR054C REV7P38927 245 aa4.43□□□□□ -1.7
VHS3YOR054C BUD16P39988 312 aa4.43□□□□□ -1.7
VHS3YOR054C FMS1P50264 508 aa4.43□□□□□ -1.7
VHS3YOR054C SRT1Q03175 343 aa4.43□□□□□ -1.7
VHS3YOR054C SLK19Q08581 821 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C YOR296WQ08748 1289 aa4.43□□□□□ -1.7
VHS3YOR054C OCA6Q12454 224 aa4.43□□□□□ -1.7
VHS3YOR054C RPS19AP07280 144 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C RPS19BP07281 144 aaPredicted RBP4.43□□□□□ -1.7
VHS3YOR054C PHO13P19881 312 aa4.43□□□□□ -1.7
VHS3YOR054C FAR1P21268 830 aa4.43□□□□□ -1.7
VHS3YOR054C KTR1P27810 393 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C YBL036CP38197 257 aa4.43□□□□□ -1.7
VHS3YOR054C AMN1P38285 549 aaPredicted RBP4.43□□□□□ -1.7
VHS3YOR054C OSH3P38713 996 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C SMF1P38925 575 aa4.43□□□□□ -1.7
VHS3YOR054C SYG1P40528 902 aa4.43□□□□□ -1.7
VHS3YOR054C MDJ2P42834 146 aa4.43□□□□□ -1.7
VHS3YOR054C GYP7P48365 746 aa4.43□□□□□ -1.7
VHS3YOR054C PCL10P53124 433 aa4.43□□□□□ -1.7
VHS3YOR054C ERP6P53198 216 aa4.43□□□□□ -1.7
VHS3YOR054C BTN2P53286 410 aa4.43□□□□□ -1.7
VHS3YOR054C GTR1Q00582 310 aa4.43□□□□□ -1.7
VHS3YOR054C TRS120Q04183 1289 aa4.43□□□□□ -1.7
VHS3YOR054C SPN1Q06505 410 aaPredicted RBP4.43□□□□□ -1.7
VHS3YOR054C TSR2Q06672 205 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C BDF2Q07442 638 aa4.43□□□□□ -1.7
VHS3YOR054C NOP6Q07623 225 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C TYW1Q08960 810 aaKnown RBP4.43□□□□□ -1.7
VHS3YOR054C ELG1Q12050 791 aa4.43□□□□□ -1.7
VHS3YOR054C NUR1Q12066 484 aa4.43□□□□□ -1.7
VHS3YOR054C YPL150WQ12152 901 aa4.43□□□□□ -1.7
VHS3YOR054C ADE3P07245 946 aaKnown RBP4.42□□□□□ -1.7
VHS3YOR054C ERG12P07277 443 aa4.42□□□□□ -1.7
VHS3YOR054C TPM1P17536 199 aaKnown RBP4.42□□□□□ -1.7
VHS3YOR054C ATO2P32907 282 aa4.42□□□□□ -1.7
VHS3YOR054C YKL133CP36066 463 aa4.42□□□□□ -1.7
VHS3YOR054C AAP1P37898 856 aaKnown RBP4.42□□□□□ -1.7
VHS3YOR054C FZO1P38297 855 aa4.42□□□□□ -1.7
VHS3YOR054C KAP123P40069 1113 aaKnown RBP4.42□□□□□ -1.7
VHS3YOR054C SCS2P40075 244 aaKnown RBP4.42□□□□□ -1.7
VHS3YOR054C PXA1P41909 870 aa4.42□□□□□ -1.7
VHS3YOR054C VTC2P43585 828 aa4.42□□□□□ -1.7
VHS3YOR054C ZPR1P53303 486 aaKnown RBP4.42□□□□□ -1.7
VHS3YOR054C YNL144CP53907 740 aa4.42□□□□□ -1.7
VHS3YOR054C MSH6Q03834 1242 aa4.42□□□□□ -1.7
VHS3YOR054C VAC14Q06708 880 aa4.42□□□□□ -1.7
VHS3YOR054C VAM6Q07468 1049 aa4.42□□□□□ -1.7
VHS3YOR054C SLM3Q12093 417 aa4.42□□□□□ -1.7
VHS3YOR054C GNT1Q12096 491 aa4.42□□□□□ -1.7
VHS3YOR054C RMP1Q12530 201 aa4.42□□□□□ -1.7
VHS3YOR054C PET122P10355 254 aa4.41□□□□□ -1.7
VHS3YOR054C CNS1P33313 385 aa4.41□□□□□ -1.7
VHS3YOR054C KES1P35844 434 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C ATG14P38270 344 aa4.41□□□□□ -1.7
VHS3YOR054C SET2P46995 733 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C TMA22P47089 198 aaPredicted RBP4.41□□□□□ -1.7
VHS3YOR054C RPA14P50106 137 aa4.41□□□□□ -1.7
VHS3YOR054C SDA1P53313 767 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C RPL34AP87262 121 aaPredicted RBP4.41□□□□□ -1.7
VHS3YOR054C RMD1Q03441 430 aa4.41□□□□□ -1.7
VHS3YOR054C MGR3Q04472 501 aa4.41□□□□□ -1.7
VHS3YOR054C SPP382Q06411 708 aaPredicted RBP4.41□□□□□ -1.7
VHS3YOR054C MAG2Q06436 670 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C RIM20Q12033 661 aa4.41□□□□□ -1.7
VHS3YOR054C WHI5Q12416 295 aa4.41□□□□□ -1.7
VHS3YOR054C UTP10P42945 1769 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C PRP4P20053 465 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C SCJ1P25303 377 aa4.41□□□□□ -1.7
VHS3YOR054C UGA3P26370 528 aa4.41□□□□□ -1.7
VHS3YOR054C YKR075CP36155 307 aa4.41□□□□□ -1.7
VHS3YOR054C PXL1P36166 706 aa4.41□□□□□ -1.7
VHS3YOR054C YBR287WP38355 427 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms