RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C GIC2Q06648 383 aa3.12□□□□□ -1.91
DNL4YOR005C LEU1P07264 779 aaKnown RBP3.11□□□□□ -1.91
DNL4YOR005C INO1P11986 533 aa3.11□□□□□ -1.91
DNL4YOR005C MEF1P25039 761 aa3.11□□□□□ -1.91
DNL4YOR005C IRE1P32361 1115 aa3.11□□□□□ -1.91
DNL4YOR005C HIR1P32479 840 aa3.11□□□□□ -1.91
DNL4YOR005C YBR071WP38243 211 aa3.11□□□□□ -1.91
DNL4YOR005C AMN1P38285 549 aaPredicted RBP3.11□□□□□ -1.91
DNL4YOR005C ALO1P54783 526 aaKnown RBP3.11□□□□□ -1.91
DNL4YOR005C ROD1Q02805 837 aa3.11□□□□□ -1.91
DNL4YOR005C HBN1Q96VH4 193 aa3.11□□□□□ -1.91
DNL4YOR005C SPT7P35177 1332 aa3.11□□□□□ -1.91
DNL4YOR005C DOP1Q03921 1698 aa3.11□□□□□ -1.91
DNL4YOR005C TRK1P12685 1235 aa3.11□□□□□ -1.91
DNL4YOR005C AMS1P22855 1083 aa3.11□□□□□ -1.91
DNL4YOR005C GBP2P25555 427 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
DNL4YOR005C PIN4P34217 668 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
DNL4YOR005C MOT2P34909 587 aaKnown RBP3.11□□□□□ -1.91
DNL4YOR005C CUS1Q02554 436 aaPredicted RBP3.11□□□□□ -1.91
DNL4YOR005C TIF35Q04067 274 aaKnown RBP3.11□□□□□ -1.91
DNL4YOR005C RKM4Q12504 494 aa3.11□□□□□ -1.91
DNL4YOR005C NUP145P49687 1317 aa3.11□□□□□ -1.91
DNL4YOR005C EUG1P32474 517 aa3.11□□□□□ -1.91
DNL4YOR005C HBS1P32769 611 aaKnown RBP3.11□□□□□ -1.91
DNL4YOR005C SEC26P41810 973 aaKnown RBP3.11□□□□□ -1.91
DNL4YOR005C TY4A-JP47023 414 aa3.11□□□□□ -1.91
DNL4YOR005C PSH1Q12161 406 aa3.11□□□□□ -1.91
DNL4YOR005C YPL066WQ12194 479 aa3.11□□□□□ -1.91
DNL4YOR005C PDC6P26263 563 aaKnown RBP3.1□□□□□ -1.91
DNL4YOR005C SLA1P32790 1244 aa3.1□□□□□ -1.91
DNL4YOR005C CAB3P36076 571 aa3.1□□□□□ -1.91
DNL4YOR005C MBP1P39678 833 aa3.1□□□□□ -1.91
DNL4YOR005C GPP1P41277 250 aaKnown RBP3.1□□□□□ -1.91
DNL4YOR005C COG4Q06096 861 aa3.1□□□□□ -1.91
DNL4YOR005C TY1A-DR3Q12441 440 aa3.1□□□□□ -1.91
DNL4YOR005C TOP3P13099 656 aa3.1□□□□□ -1.91
DNL4YOR005C EXO5P38289 585 aa3.1□□□□□ -1.91
DNL4YOR005C SHU2P38957 223 aa3.1□□□□□ -1.91
DNL4YOR005C PEA2P40091 420 aa3.1□□□□□ -1.91
DNL4YOR005C MGS1P40151 587 aa3.1□□□□□ -1.91
DNL4YOR005C FAP7Q12055 197 aaPredicted RBP3.1□□□□□ -1.91
DNL4YOR005C NYV1Q12255 253 aa3.1□□□□□ -1.91
DNL4YOR005C PRS1P32895 427 aaKnown RBP3.09□□□□□ -1.91
DNL4YOR005C CCC2P38995 1004 aa3.09□□□□□ -1.91
DNL4YOR005C YGL176CP46945 554 aa3.09□□□□□ -1.91
DNL4YOR005C YNR040WP53736 256 aa3.09□□□□□ -1.91
DNL4YOR005C GLO4Q12320 285 aa3.09□□□□□ -1.91
DNL4YOR005C PDR10P51533 1564 aa3.09□□□□□ -1.92
DNL4YOR005C SST2P11972 698 aaKnown RBP3.09□□□□□ -1.92
DNL4YOR005C SYP1P25623 870 aaKnown RBP3.09□□□□□ -1.92
DNL4YOR005C MTC2P34246 357 aa3.09□□□□□ -1.92
DNL4YOR005C YKL107WP34251 309 aa3.09□□□□□ -1.92
DNL4YOR005C TYS1P36421 394 aaKnown RBP3.09□□□□□ -1.92
DNL4YOR005C VPS27P40343 622 aaKnown RBP3.09□□□□□ -1.92
DNL4YOR005C SDA1P53313 767 aaKnown RBP3.09□□□□□ -1.92
DNL4YOR005C YNL034WP53963 612 aa3.09□□□□□ -1.92
DNL4YOR005C YNL018CP53976 612 aa3.09□□□□□ -1.92
DNL4YOR005C UBX4P54730 416 aa3.09□□□□□ -1.92
DNL4YOR005C HVG1P0CE11 249 aa3.08□□□□□ -1.92
DNL4YOR005C PGI1P12709 554 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C RGP1P16664 663 aa3.08□□□□□ -1.92
DNL4YOR005C DBP5P20449 482 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C PLC1P32383 869 aa3.08□□□□□ -1.92
DNL4YOR005C TRZ1P36159 838 aaPredicted RBP3.08□□□□□ -1.92
DNL4YOR005C AHP1P38013 176 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C PEX14P53112 341 aa3.08□□□□□ -1.92
DNL4YOR005C EST2Q06163 884 aa3.08□□□□□ -1.92
DNL4YOR005C MPD2Q99316 277 aa3.08□□□□□ -1.92
DNL4YOR005C ULS1Q08562 1619 aa3.08□□□□□ -1.92
DNL4YOR005C TOM70P07213 617 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C DAL1P32375 460 aa3.08□□□□□ -1.92
DNL4YOR005C MPE1P35728 441 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C BAP2P38084 609 aa3.08□□□□□ -1.92
DNL4YOR005C PAN5P38787 379 aa3.08□□□□□ -1.92
DNL4YOR005C DSS1P39112 969 aa3.08□□□□□ -1.92
DNL4YOR005C NOC2P39744 710 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C YER156CP40093 338 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C UBP6P43593 499 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C KIP3P53086 805 aaKnown RBP3.08□□□□□ -1.92
DNL4YOR005C MTQ2Q03920 221 aaPredicted RBP3.08□□□□□ -1.92
DNL4YOR005C HED1Q03937 162 aa3.08□□□□□ -1.92
DNL4YOR005C HFD1Q04458 532 aa3.08□□□□□ -1.92
DNL4YOR005C NUP159P40477 1460 aa3.07□□□□□ -1.92
DNL4YOR005C EBP2P36049 427 aaKnown RBP3.07□□□□□ -1.92
DNL4YOR005C SIP5P40210 489 aaKnown RBP3.07□□□□□ -1.92
DNL4YOR005C CNN1P43618 361 aa3.07□□□□□ -1.92
DNL4YOR005C PIP2P52960 996 aa3.07□□□□□ -1.92
DNL4YOR005C RAT1Q02792 1006 aaKnown RBP3.07□□□□□ -1.92
DNL4YOR005C MTC5Q03897 1148 aa3.07□□□□□ -1.92
DNL4YOR005C TRE2Q08693 809 aa3.07□□□□□ -1.92
DNL4YOR005C SRB8P25648 1427 aa3.07□□□□□ -1.92
DNL4YOR005C FUS1P11710 512 aa3.07□□□□□ -1.92
DNL4YOR005C YEF3P16521 1044 aaKnown RBP3.07□□□□□ -1.92
DNL4YOR005C GSY1P23337 708 aa3.07□□□□□ -1.92
DNL4YOR005C VBA3P25594 458 aa3.07□□□□□ -1.92
DNL4YOR005C DOM34P33309 386 aa3.07□□□□□ -1.92
DNL4YOR005C MPH1P40562 993 aa3.07□□□□□ -1.92
DNL4YOR005C AAD14P42884 376 aa3.07□□□□□ -1.92
DNL4YOR005C VTC4P47075 721 aa3.07□□□□□ -1.92
DNL4YOR005C GIR2Q03768 265 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms