RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeast

Gene TRM112, Length 408 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM112	YNR046W	THI4	P32318	326 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	TIM23	P32897	222 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	NNK1	P36003	928 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	QNS1	P38795	714 aa	Known RBP	4.94	□□□□□ -1.62
TRM112	YNR046W	MBP1	P39678	833 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	ALR2	P43553	858 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	PFD1	P46988	109 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	KIP3	P53086	805 aa	Known RBP	4.94	□□□□□ -1.62
TRM112	YNR046W	YGR035C	P53222	116 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	DOT1	Q04089	582 aa	Known RBP	4.94	□□□□□ -1.62
TRM112	YNR046W	HPF1	Q05164	967 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	SPP382	Q06411	708 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM112	YNR046W	YDL124W	Q07551	312 aa	Known RBP	4.94	□□□□□ -1.62
TRM112	YNR046W	YDL176W	Q12027	708 aa		4.94	□□□□□ -1.62
TRM112	YNR046W	RET1	P22276	1149 aa	Known RBP	4.93	□□□□□ -1.62
TRM112	YNR046W	CDC11	P32458	415 aa		4.93	□□□□□ -1.62
TRM112	YNR046W	RRM3	P38766	723 aa		4.93	□□□□□ -1.62
TRM112	YNR046W	MNN1	P39106	762 aa		4.93	□□□□□ -1.62
TRM112	YNR046W	RSA3	Q05942	220 aa	Known RBP	4.93	□□□□□ -1.62
TRM112	YNR046W	BOI2	P39969	1040 aa		4.92	□□□□□ -1.62
TRM112	YNR046W	YLR257W	Q06146	321 aa	Known RBP	4.92	□□□□□ -1.62
TRM112	YNR046W	UBX5	Q06682	500 aa		4.92	□□□□□ -1.62
TRM112	YNR046W	HRK1	Q08732	759 aa	Known RBP	4.92	□□□□□ -1.62
TRM112	YNR046W	YPL066W	Q12194	479 aa		4.92	□□□□□ -1.62
TRM112	YNR046W	SMY2	P32909	740 aa	Known RBP	4.91	□□□□□ -1.62
TRM112	YNR046W	YNR014W	P53719	212 aa		4.91	□□□□□ -1.62
TRM112	YNR046W	TAF8	Q03750	510 aa		4.91	□□□□□ -1.62
TRM112	YNR046W	SPO21	Q12411	609 aa		4.91	□□□□□ -1.62
TRM112	YNR046W	YGR161W-C	Q3E744	92 aa		4.91	□□□□□ -1.62
TRM112	YNR046W	AI1	P03875	834 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	KIP1	P28742	1111 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	SFA1	P32771	386 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	MSH4	P40965	878 aa	Predicted RBP	4.9	□□□□□ -1.63
TRM112	YNR046W	YGL081W	P53156	320 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	NCE103	P53615	221 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	IOC4	Q04213	475 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	YDR306C	Q06640	478 aa		4.9	□□□□□ -1.63
TRM112	YNR046W	TY1A-NL1	Q12391	440 aa	Known RBP	4.9	□□□□□ -1.63
TRM112	YNR046W	ERR1	P0CX10	437 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	ERR2	P0CX11	437 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	YER152C	P10356	443 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	RSC6	P25632	483 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	AAR2	P32357	355 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM112	YNR046W	GPT2	P36148	743 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	PNT1	P38969	423 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	CCC2	P38995	1004 aa		4.89	□□□□□ -1.63
TRM112	YNR046W	RPN3	P40016	523 aa	Known RBP	4.89	□□□□□ -1.63
TRM112	YNR046W	SIP5	P40210	489 aa	Known RBP	4.89	□□□□□ -1.63
TRM112	YNR046W	SRP1	Q02821	542 aa	Known RBP	4.89	□□□□□ -1.63
TRM112	YNR046W	ADE8	P04161	214 aa		4.88	□□□□□ -1.63
TRM112	YNR046W	RPL11A	P0C0W9	174 aa	Known RBP	4.88	□□□□□ -1.63
TRM112	YNR046W	MSH2	P25847	964 aa		4.88	□□□□□ -1.63
TRM112	YNR046W	DOM34	P33309	386 aa		4.88	□□□□□ -1.63
TRM112	YNR046W	GEM1	P39722	662 aa		4.88	□□□□□ -1.63
TRM112	YNR046W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	RIP-Chip
TRM112	YNR046W	RPL11B	Q3E757	174 aa	Predicted RBP	4.88	□□□□□ -1.63
TRM112	YNR046W	HBN1	Q96VH4	193 aa		4.88	□□□□□ -1.63
TRM112	YNR046W	THS1	P04801	734 aa	Known RBP	4.87	□□□□□ -1.63
TRM112	YNR046W	PPH3	P32345	308 aa		4.87	□□□□□ -1.63
TRM112	YNR046W	HBS1	P32769	611 aa	Known RBP	4.87	□□□□□ -1.63
TRM112	YNR046W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
TRM112	YNR046W	HSV2	P50079	448 aa	Predicted RBP	4.87	□□□□□ -1.63
TRM112	YNR046W	RTA1	P53047	317 aa		4.87	□□□□□ -1.63
TRM112	YNR046W	HOS3	Q02959	697 aa	Known RBP	4.87	□□□□□ -1.63
TRM112	YNR046W	UGO1	Q03327	502 aa		4.87	□□□□□ -1.63
TRM112	YNR046W	DUS3	Q06053	668 aa	Known RBP	4.87	□□□□□ -1.63
TRM112	YNR046W	GIC2	Q06648	383 aa		4.87	□□□□□ -1.63
TRM112	YNR046W	RPS4A	P0CX35	261 aa	Known RBP	4.86	□□□□□ -1.63
TRM112	YNR046W	RPS4B	P0CX36	261 aa	Known RBP	4.86	□□□□□ -1.63
TRM112	YNR046W	TRK2	P28584	889 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	BET3	P36149	193 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	GPB2	P39717	880 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	SIT1	P39980	628 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	BUD9	P53226	547 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	TNA1	P53322	534 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	TPP1	Q03796	238 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	ACM1	Q08981	209 aa		4.86	□□□□□ -1.63
TRM112	YNR046W	NOP14	Q99207	810 aa	Known RBP	4.86	□□□□□ -1.63
TRM112	YNR046W	TOM70	P07213	617 aa	Known RBP	4.85	□□□□□ -1.63
TRM112	YNR046W	SFP1	P32432	683 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	YSC84	P32793	468 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	YBR284W	P38150	797 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	MCX1	P38323	520 aa	Predicted RBP	4.85	□□□□□ -1.63
TRM112	YNR046W	MXR1	P40029	184 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	SBE2	P42223	864 aa	Known RBP	4.85	□□□□□ -1.63
TRM112	YNR046W	YJL045W	P47052	634 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	ALT1	P52893	592 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	THI72	Q08579	599 aa		4.85	□□□□□ -1.63
TRM112	YNR046W	PUS7	Q08647	676 aa	Known RBP	4.85	□□□□□ -1.63
TRM112	YNR046W	COQ4	O13525	335 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	AI3	P03877	415 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	SRM1	P21827	482 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	DBP2	P24783	546 aa	Known RBP	4.84	□□□□□ -1.63
TRM112	YNR046W	TSR4	P25040	408 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	PEX6	P33760	1030 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	PET10	P36139	283 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	GDH3	P39708	457 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	UBP6	P43593	499 aa	Known RBP	4.84	□□□□□ -1.63
TRM112	YNR046W	YJR142W	P47173	342 aa		4.84	□□□□□ -1.63
TRM112	YNR046W	ARI1	P53111	347 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms