RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YJL045WP47052 634 aa3.05□□□□□ -1.92
SGD1YLR336C PHM7Q12252 991 aa3.05□□□□□ -1.92
SGD1YLR336C YPR053CQ6Q5F3 151 aa3.05□□□□□ -1.92
SGD1YLR336C RPS4AP0CX35 261 aaKnown RBP3.04□□□□□ -1.92
SGD1YLR336C RPS4BP0CX36 261 aaKnown RBP3.04□□□□□ -1.92
SGD1YLR336C STI1P15705 589 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
SGD1YLR336C DBP2P24783 546 aaKnown RBP3.04□□□□□ -1.92
SGD1YLR336C YKL091CP33324 310 aaKnown RBP3.04□□□□□ -1.92
SGD1YLR336C TAT1P38085 619 aa3.04□□□□□ -1.92
SGD1YLR336C YFL054CP43549 646 aa3.04□□□□□ -1.92
SGD1YLR336C TIM54P47045 478 aa3.04□□□□□ -1.92
SGD1YLR336C BUD6P41697 788 aa3.04□□□□□ -1.92
SGD1YLR336C HNT2P49775 206 aa3.04□□□□□ -1.92
SGD1YLR336C TPP1Q03796 238 aa3.04□□□□□ -1.92
SGD1YLR336C PUS7Q08647 676 aaKnown RBP3.04□□□□□ -1.92
SGD1YLR336C SPO21Q12411 609 aa3.04□□□□□ -1.92
SGD1YLR336C RPL8BP29453 256 aaKnown RBP3.03□□□□□ -1.92
SGD1YLR336C MXR1P40029 184 aa3.03□□□□□ -1.92
SGD1YLR336C IRR1P40541 1150 aa3.03□□□□□ -1.92
SGD1YLR336C RPN4Q03465 531 aa3.03□□□□□ -1.92
SGD1YLR336C FMP25Q08023 583 aa3.03□□□□□ -1.92
SGD1YLR336C CIT2P08679 460 aa3.03□□□□□ -1.92
SGD1YLR336C PGM1P33401 570 aaKnown RBP3.03□□□□□ -1.92
SGD1YLR336C PIN4P34217 668 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SGD1YLR336C WHI3P34761 661 aaKnown RBP3.03□□□□□ -1.92
SGD1YLR336C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SGD1YLR336C RCL1Q08096 367 aaPredicted RBP3.03□□□□□ -1.92
SGD1YLR336C YPL260WQ08977 551 aa3.03□□□□□ -1.92
SGD1YLR336C GNT1Q12096 491 aa3.03□□□□□ -1.92
SGD1YLR336C RPL11AP0C0W9 174 aaKnown RBP3.02□□□□□ -1.93
SGD1YLR336C SBP1P10080 294 aaKnown RBP3.02□□□□□ -1.93
SGD1YLR336C MRP8P35719 219 aa3.02□□□□□ -1.93
SGD1YLR336C PBP2P38151 413 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SGD1YLR336C PPM2Q08282 695 aa3.02□□□□□ -1.93
SGD1YLR336C FLC1Q08967 793 aa3.02□□□□□ -1.93
SGD1YLR336C RPL11BQ3E757 174 aaPredicted RBP3.02□□□□□ -1.93
SGD1YLR336C YSC84P32793 468 aa3.02□□□□□ -1.93
SGD1YLR336C PBY1P38254 753 aa3.02□□□□□ -1.93
SGD1YLR336C SAF1P38352 637 aa3.02□□□□□ -1.93
SGD1YLR336C PNT1P38969 423 aa3.02□□□□□ -1.93
SGD1YLR336C YPL034WQ03083 165 aa3.02□□□□□ -1.93
SGD1YLR336C FPR4Q06205 392 aaPredicted RBP3.02□□□□□ -1.93
SGD1YLR336C YVC1Q12324 675 aa3.02□□□□□ -1.93
SGD1YLR336C MMM1P41800 426 aa3.01□□□□□ -1.93
SGD1YLR336C YGR125WP53273 1036 aa3.01□□□□□ -1.93
SGD1YLR336C UBX5Q06682 500 aa3.01□□□□□ -1.93
SGD1YLR336C HRK1Q08732 759 aaKnown RBP3.01□□□□□ -1.93
SGD1YLR336C SAM35P14693 329 aa3.01□□□□□ -1.93
SGD1YLR336C RSP5P39940 809 aaKnown RBP3.01□□□□□ -1.93
SGD1YLR336C EAF1Q06337 982 aa3.01□□□□□ -1.93
SGD1YLR336C SPP382Q06411 708 aaPredicted RBP3.01□□□□□ -1.93
SGD1YLR336C SPO75Q07798 868 aa3.01□□□□□ -1.93
SGD1YLR336C SNF5P18480 905 aa3□□□□□ -1.93
SGD1YLR336C KRI1P42846 591 aaKnown RBP3□□□□□ -1.93
SGD1YLR336C RNH70P53331 553 aa3□□□□□ -1.93
SGD1YLR336C HOS3Q02959 697 aaKnown RBP3□□□□□ -1.93
SGD1YLR336C YLR122CQ12312 125 aa3□□□□□ -1.93
SGD1YLR336C OYE3P41816 400 aaPredicted RBP3□□□□□ -1.93
SGD1YLR336C ALR2P43553 858 aa3□□□□□ -1.93
SGD1YLR336C UTP8P53276 713 aaKnown RBP3□□□□□ -1.93
SGD1YLR336C OSH2Q12451 1283 aa3□□□□□ -1.93
SGD1YLR336C YOR131CQ12486 218 aa3□□□□□ -1.93
SGD1YLR336C CIT1P00890 479 aa2.99□□□□□ -1.93
SGD1YLR336C CAN1P04817 590 aa2.99□□□□□ -1.93
SGD1YLR336C ARE1P25628 610 aa2.99□□□□□ -1.93
SGD1YLR336C HBS1P32769 611 aaKnown RBP2.99□□□□□ -1.93
SGD1YLR336C TIM23P32897 222 aa2.99□□□□□ -1.93
SGD1YLR336C YKL151CP36059 337 aa2.99□□□□□ -1.93
SGD1YLR336C BAP2P38084 609 aa2.99□□□□□ -1.93
SGD1YLR336C RPN3P40016 523 aaKnown RBP2.99□□□□□ -1.93
SGD1YLR336C CIT3P43635 486 aa2.99□□□□□ -1.93
SGD1YLR336C ERP6P53198 216 aa2.99□□□□□ -1.93
SGD1YLR336C RCM1P53972 490 aa2.99□□□□□ -1.93
SGD1YLR336C ERR1P0CX10 437 aa2.99□□□□□ -1.93
SGD1YLR336C ERR2P0CX11 437 aa2.99□□□□□ -1.93
SGD1YLR336C CHS2P14180 963 aa2.99□□□□□ -1.93
SGD1YLR336C HSP60P19882 572 aaKnown RBP2.99□□□□□ -1.93
SGD1YLR336C SLA2P33338 968 aa2.99□□□□□ -1.93
SGD1YLR336C CCT8P47079 568 aaKnown RBP2.99□□□□□ -1.93
SGD1YLR336C NRD1P53617 575 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SGD1YLR336C TAF8Q03750 510 aa2.99□□□□□ -1.93
SGD1YLR336C AIM44Q99299 758 aa2.99□□□□□ -1.93
SGD1YLR336C COQ2P32378 372 aa2.99□□□□□ -1.93
SGD1YLR336C BET3P36149 193 aa2.99□□□□□ -1.93
SGD1YLR336C UGA2P38067 497 aa2.99□□□□□ -1.93
SGD1YLR336C YHL012WP38709 493 aa2.99□□□□□ -1.93
SGD1YLR336C PEX7P39108 375 aa2.99□□□□□ -1.93
SGD1YLR336C SNF7P39929 240 aaKnown RBP2.99□□□□□ -1.93
SGD1YLR336C NUP82P40368 713 aa2.99□□□□□ -1.93
SGD1YLR336C TNA1P53322 534 aa2.99□□□□□ -1.93
SGD1YLR336C GCD1P09032 578 aaPredicted RBP2.98□□□□□ -1.93
SGD1YLR336C GUS1P46655 708 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SGD1YLR336C RTA1P53047 317 aa2.98□□□□□ -1.93
SGD1YLR336C YGR130CP53278 816 aa2.98□□□□□ -1.93
SGD1YLR336C HRQ1Q05549 1077 aa2.98□□□□□ -1.93
SGD1YLR336C YDR306CQ06640 478 aa2.98□□□□□ -1.93
SGD1YLR336C ACM1Q08981 209 aa2.98□□□□□ -1.93
SGD1YLR336C TRP3P00937 484 aa2.98□□□□□ -1.93
SGD1YLR336C TOP3P13099 656 aa2.98□□□□□ -1.93
SGD1YLR336C YBR284WP38150 797 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms