RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W SSB2P40150 613 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W CAF130P53280 1122 aaPredicted RBP5.68□□□□□ -1.5
PWP1YLR196W RNH70P53331 553 aa5.68□□□□□ -1.5
PWP1YLR196W CWC21Q03375 135 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W YML108WQ03759 105 aa5.68□□□□□ -1.5
PWP1YLR196W SWA2Q06677 668 aa5.68□□□□□ -1.5
PWP1YLR196W GRC3Q07845 632 aa5.68□□□□□ -1.5
PWP1YLR196W CHS5Q12114 671 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W CDC37P06101 506 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W KIN1P13185 1064 aa5.68□□□□□ -1.5
PWP1YLR196W TRM1P15565 570 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W TPM1P17536 199 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
PWP1YLR196W ECM32P32644 1121 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W SMY2P32909 740 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W BMH2P34730 273 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W MIA40P36046 403 aa5.68□□□□□ -1.5
PWP1YLR196W CST6P40535 587 aa5.68□□□□□ -1.5
PWP1YLR196W CEG1Q01159 459 aaPredicted RBP5.68□□□□□ -1.5
PWP1YLR196W MTC5Q03897 1148 aa5.68□□□□□ -1.5
PWP1YLR196W NKP2Q06162 153 aa5.68□□□□□ -1.5
PWP1YLR196W AOS1Q06624 347 aa5.68□□□□□ -1.5
PWP1YLR196W BRX1Q08235 291 aaKnown RBP5.68□□□□□ -1.5
PWP1YLR196W SFI1Q12369 946 aa5.68□□□□□ -1.5
PWP1YLR196W DPH6Q12429 685 aa5.68□□□□□ -1.5
PWP1YLR196W RPS3P05750 240 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W MRM1P25270 412 aa5.67□□□□□ -1.5
PWP1YLR196W OCA4P25366 362 aa5.67□□□□□ -1.5
PWP1YLR196W KRR1P25586 316 aaPredicted RBP5.67□□□□□ -1.5
PWP1YLR196W ITR1P30605 584 aa5.67□□□□□ -1.5
PWP1YLR196W PXA2P34230 853 aa5.67□□□□□ -1.5
PWP1YLR196W SLD2P34252 453 aa5.67□□□□□ -1.5
PWP1YLR196W MRP8P35719 219 aa5.67□□□□□ -1.5
PWP1YLR196W SRL3P36167 246 aa5.67□□□□□ -1.5
PWP1YLR196W GRX7P38068 203 aa5.67□□□□□ -1.5
PWP1YLR196W PSY4P38193 441 aa5.67□□□□□ -1.5
PWP1YLR196W UBP14P38237 781 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W SAK1P38990 1142 aa5.67□□□□□ -1.5
PWP1YLR196W DOT6P40059 670 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W RIM21P48565 533 aa5.67□□□□□ -1.5
PWP1YLR196W LSG1P53145 640 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W COP1P53622 1201 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W ARP5P53946 755 aa5.67□□□□□ -1.5
PWP1YLR196W RAD33Q04231 177 aa5.67□□□□□ -1.5
PWP1YLR196W TAF3Q12297 353 aa5.67□□□□□ -1.5
PWP1YLR196W LSO2Q3E772 92 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W PDR18P53756 1333 aa5.67□□□□□ -1.5
PWP1YLR196W RPO41P13433 1351 aaKnown RBP5.67□□□□□ -1.5
PWP1YLR196W TRX2P22803 104 aaKnown RBP5.66□□□□□ -1.5
PWP1YLR196W AAD3P25612 363 aa5.66□□□□□ -1.5
PWP1YLR196W SET3P36124 751 aa5.66□□□□□ -1.5
PWP1YLR196W FUI1P38196 639 aa5.66□□□□□ -1.5
PWP1YLR196W GDT1P38301 280 aaPredicted RBP5.66□□□□□ -1.5
PWP1YLR196W RFC1P38630 861 aaKnown RBP5.66□□□□□ -1.5
PWP1YLR196W ESL1P40456 1118 aa5.66□□□□□ -1.5
PWP1YLR196W RSM25P40496 264 aa5.66□□□□□ -1.5
PWP1YLR196W PHB1P40961 287 aa5.66□□□□□ -1.5
PWP1YLR196W CEP3P40969 608 aa5.66□□□□□ -1.5
PWP1YLR196W ASI1P54074 624 aa5.66□□□□□ -1.5
PWP1YLR196W ADA2Q02336 434 aa5.66□□□□□ -1.5
PWP1YLR196W ULP1Q02724 621 aa5.66□□□□□ -1.5
PWP1YLR196W IOC2Q12072 812 aa5.66□□□□□ -1.5
PWP1YLR196W MAM3Q12296 706 aa5.66□□□□□ -1.5
PWP1YLR196W DIT1P21623 536 aa5.65□□□□□ -1.5
PWP1YLR196W CDC60P26637 1090 aaKnown RBP5.65□□□□□ -1.5
PWP1YLR196W GRX4P32642 244 aa5.65□□□□□ -1.5
PWP1YLR196W SEC66P33754 206 aa5.65□□□□□ -1.5
PWP1YLR196W STE13P33894 931 aa5.65□□□□□ -1.5
PWP1YLR196W SET1P38827 1080 aaKnown RBP5.65□□□□□ -1.5
PWP1YLR196W GTT3P39996 337 aa5.65□□□□□ -1.5
PWP1YLR196W YRF1-2P40105 1681 aa5.65□□□□□ -1.5
PWP1YLR196W GCD10P41814 478 aa5.65□□□□□ -1.5
PWP1YLR196W STU2P46675 888 aa5.65□□□□□ -1.5
PWP1YLR196W NPA3P47122 385 aa5.65□□□□□ -1.5
PWP1YLR196W ROM2P51862 1356 aaKnown RBP5.65□□□□□ -1.5
PWP1YLR196W YGL242CP53066 181 aa5.65□□□□□ -1.5
PWP1YLR196W DSD1P53095 428 aa5.65□□□□□ -1.5
PWP1YLR196W DIP5P53388 608 aa5.65□□□□□ -1.5
PWP1YLR196W ZDS2P54786 942 aa5.65□□□□□ -1.5
PWP1YLR196W YMR018WQ04364 514 aa5.65□□□□□ -1.5
PWP1YLR196W SPN1Q06505 410 aaPredicted RBP5.65□□□□□ -1.5
PWP1YLR196W RSC3Q06639 885 aa5.65□□□□□ -1.5
PWP1YLR196W TSR1Q07381 788 aaKnown RBP5.65□□□□□ -1.5
PWP1YLR196W GAS4Q08271 471 aa5.65□□□□□ -1.5
PWP1YLR196W NOB1Q08444 459 aaKnown RBP5.65□□□□□ -1.5
PWP1YLR196W NOT5Q12514 560 aaPredicted RBP5.65□□□□□ -1.5
PWP1YLR196W FOB1O13329 566 aa5.65□□□□□ -1.51
PWP1YLR196W LEU2P04173 364 aaPredicted RBP5.65□□□□□ -1.51
PWP1YLR196W HIS3P06633 220 aa5.65□□□□□ -1.51
PWP1YLR196W SSC1P0CS90 654 aaKnown RBP5.65□□□□□ -1.51
PWP1YLR196W ADH4P10127 382 aa5.65□□□□□ -1.51
PWP1YLR196W MCM2P29469 868 aa5.65□□□□□ -1.51
PWP1YLR196W XRS2P33301 854 aa5.65□□□□□ -1.51
PWP1YLR196W BUD2P33314 1104 aa5.65□□□□□ -1.51
PWP1YLR196W TIF5P38431 405 aaKnown RBP5.65□□□□□ -1.51
PWP1YLR196W APE4P38821 490 aa5.65□□□□□ -1.51
PWP1YLR196W VID28P40547 921 aa5.65□□□□□ -1.51
PWP1YLR196W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
PWP1YLR196W ACF4P47129 309 aa5.65□□□□□ -1.51
PWP1YLR196W SPO1P53541 631 aa5.65□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms