RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C RAD5P32849 1169 aaPredicted RBP5.31□□□□□ -1.56
CAF4YKR036C SEC66P33754 206 aa5.31□□□□□ -1.56
CAF4YKR036C SRL3P36167 246 aa5.31□□□□□ -1.56
CAF4YKR036C PCS60P38137 543 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
CAF4YKR036C EXO84P38261 753 aa5.31□□□□□ -1.56
CAF4YKR036C PNT1P38969 423 aa5.31□□□□□ -1.56
CAF4YKR036C YRB1P41920 201 aaKnown RBP5.31□□□□□ -1.56
CAF4YKR036C RMD1Q03441 430 aa5.31□□□□□ -1.56
CAF4YKR036C CST9Q06032 482 aa5.31□□□□□ -1.56
CAF4YKR036C GGA1Q06336 557 aa5.31□□□□□ -1.56
CAF4YKR036C THI3Q07471 609 aa5.31□□□□□ -1.56
CAF4YKR036C RMP1Q12530 201 aa5.31□□□□□ -1.56
CAF4YKR036C MCM1P11746 286 aa5.31□□□□□ -1.56
CAF4YKR036C CLN1P20437 546 aa5.31□□□□□ -1.56
CAF4YKR036C LHS1P36016 881 aa5.31□□□□□ -1.56
CAF4YKR036C ECM4P36156 370 aa5.31□□□□□ -1.56
CAF4YKR036C RSC30P38781 883 aa5.31□□□□□ -1.56
CAF4YKR036C AIM20P40451 204 aa5.31□□□□□ -1.56
CAF4YKR036C SPO22P40511 975 aa5.31□□□□□ -1.56
CAF4YKR036C PXA1P41909 870 aa5.31□□□□□ -1.56
CAF4YKR036C LEM3P42838 414 aa5.31□□□□□ -1.56
CAF4YKR036C ADA2Q02336 434 aa5.31□□□□□ -1.56
CAF4YKR036C KRE28Q04431 385 aa5.31□□□□□ -1.56
CAF4YKR036C YKU80Q04437 629 aa5.31□□□□□ -1.56
CAF4YKR036C FAR8Q05040 523 aa5.31□□□□□ -1.56
CAF4YKR036C VAC14Q06708 880 aa5.31□□□□□ -1.56
CAF4YKR036C CDC10P25342 322 aaKnown RBP5.3□□□□□ -1.56
CAF4YKR036C YKT6P36015 200 aaKnown RBP5.3□□□□□ -1.56
CAF4YKR036C REV7P38927 245 aa5.3□□□□□ -1.56
CAF4YKR036C BEM4P39011 633 aa5.3□□□□□ -1.56
CAF4YKR036C HGH1P48362 394 aaKnown RBP5.3□□□□□ -1.56
CAF4YKR036C ORM1P53224 222 aa5.3□□□□□ -1.56
CAF4YKR036C YGR122WP53272 402 aa5.3□□□□□ -1.56
CAF4YKR036C MTC5Q03897 1148 aa5.3□□□□□ -1.56
CAF4YKR036C MET7Q08645 548 aa5.3□□□□□ -1.56
CAF4YKR036C NUR1Q12066 484 aa5.3□□□□□ -1.56
CAF4YKR036C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
CAF4YKR036C NHA1Q99271 985 aa5.3□□□□□ -1.56
CAF4YKR036C TY4B-PA0A0B7P3V8 1104 aa5.29□□□□□ -1.56
CAF4YKR036C SEC23P15303 768 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C TUP1P16649 713 aa5.29□□□□□ -1.56
CAF4YKR036C RAD53P22216 821 aa5.29□□□□□ -1.56
CAF4YKR036C MAC1P35192 417 aa5.29□□□□□ -1.56
CAF4YKR036C LIN1P38852 340 aaPredicted RBP5.29□□□□□ -1.56
CAF4YKR036C SMF1P38925 575 aa5.29□□□□□ -1.56
CAF4YKR036C MDJ2P42834 146 aa5.29□□□□□ -1.56
CAF4YKR036C JJJ1P53863 590 aa5.29□□□□□ -1.56
CAF4YKR036C MMR1Q06324 491 aa5.29□□□□□ -1.56
CAF4YKR036C MAG2Q06436 670 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C IOC2Q12072 812 aa5.29□□□□□ -1.56
CAF4YKR036C FLO11P08640 1367 aa5.29□□□□□ -1.56
CAF4YKR036C LCB1P25045 558 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C MCM4P30665 933 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C SWC3P31376 625 aa5.29□□□□□ -1.56
CAF4YKR036C CDC11P32458 415 aa5.29□□□□□ -1.56
CAF4YKR036C MOT2P34909 587 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C APE3P37302 537 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C ECM21P38167 1117 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C YHL017WP38745 532 aa5.29□□□□□ -1.56
CAF4YKR036C VID27P40157 782 aa5.29□□□□□ -1.56
CAF4YKR036C ARI1P53111 347 aaKnown RBP5.29□□□□□ -1.56
CAF4YKR036C IST1P53843 298 aaPredicted RBP5.29□□□□□ -1.56
CAF4YKR036C ASI1P54074 624 aa5.29□□□□□ -1.56
CAF4YKR036C YPL109CQ02981 657 aa5.29□□□□□ -1.56
CAF4YKR036C IRC4Q03036 179 aa5.29□□□□□ -1.56
CAF4YKR036C TOS4Q06266 489 aa5.29□□□□□ -1.56
CAF4YKR036C ACK1Q07622 623 aaPredicted RBP5.29□□□□□ -1.56
CAF4YKR036C PSF3Q12146 194 aa5.29□□□□□ -1.56
CAF4YKR036C NKP1Q12493 238 aa5.29□□□□□ -1.56
CAF4YKR036C YOL098CQ12496 1037 aa5.29□□□□□ -1.56
CAF4YKR036C ARG82P07250 355 aa5.28□□□□□ -1.56
CAF4YKR036C CNS1P33313 385 aa5.28□□□□□ -1.56
CAF4YKR036C CDC27P38042 758 aa5.28□□□□□ -1.56
CAF4YKR036C MCX1P38323 520 aaPredicted RBP5.28□□□□□ -1.56
CAF4YKR036C UTP7P40055 554 aaKnown RBP5.28□□□□□ -1.56
CAF4YKR036C EFM4P40516 257 aa5.28□□□□□ -1.56
CAF4YKR036C GCN20P43535 752 aaKnown RBP5.28□□□□□ -1.56
CAF4YKR036C JJJ2P46997 583 aa5.28□□□□□ -1.56
CAF4YKR036C MTC3P53077 123 aa5.28□□□□□ -1.56
CAF4YKR036C MRPS35P53292 345 aa5.28□□□□□ -1.56
CAF4YKR036C TIM11P81449 96 aaPredicted RBP5.28□□□□□ -1.56
CAF4YKR036C SNU66Q12420 587 aaPredicted RBP5.28□□□□□ -1.56
CAF4YKR036C NAT1P12945 854 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C GAL2P13181 574 aa5.27□□□□□ -1.57
CAF4YKR036C RPS7AP26786 190 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C NIT1P40447 199 aa5.27□□□□□ -1.57
CAF4YKR036C AXL1P40851 1208 aa5.27□□□□□ -1.57
CAF4YKR036C PCL10P53124 433 aa5.27□□□□□ -1.57
CAF4YKR036C ADE12P80210 433 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C SPC24Q04477 213 aa5.27□□□□□ -1.57
CAF4YKR036C WRS1Q12109 432 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C CHS5Q12114 671 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C OCA6Q12454 224 aa5.27□□□□□ -1.57
CAF4YKR036C TAL1P15019 335 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C BRF1P29056 596 aa5.27□□□□□ -1.57
CAF4YKR036C UBP12P39538 1254 aa5.27□□□□□ -1.57
CAF4YKR036C BRE1Q07457 700 aaKnown RBP5.27□□□□□ -1.57
CAF4YKR036C LSO1Q3E827 93 aa5.27□□□□□ -1.57
CAF4YKR036C ADE3P07245 946 aaKnown RBP5.26□□□□□ -1.57
CAF4YKR036C PIF1P07271 859 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms