RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A HXT17P53631 564 aa5.2□□□□□ -1.58
SFT1YKL006C-A HXT15P54854 567 aa5.2□□□□□ -1.58
SFT1YKL006C-A AOS1Q06624 347 aa5.2□□□□□ -1.58
SFT1YKL006C-A TMA46Q12000 345 aaKnown RBP5.2□□□□□ -1.58
SFT1YKL006C-A ELM1P32801 640 aa5.19□□□□□ -1.58
SFT1YKL006C-A RER2P35196 286 aa5.19□□□□□ -1.58
SFT1YKL006C-A MCM7P38132 845 aa5.19□□□□□ -1.58
SFT1YKL006C-A RGD1P38339 666 aa5.19□□□□□ -1.58
SFT1YKL006C-A ETP1P38748 585 aaKnown RBP5.19□□□□□ -1.58
SFT1YKL006C-A CNN1P43618 361 aa5.19□□□□□ -1.58
SFT1YKL006C-A GNP1P48813 663 aa5.19□□□□□ -1.58
SFT1YKL006C-A PRP43P53131 767 aaKnown RBP5.19□□□□□ -1.58
SFT1YKL006C-A RCL1Q08096 367 aaPredicted RBP5.19□□□□□ -1.58
SFT1YKL006C-A DBP5P20449 482 aaKnown RBP5.17□□□□□ -1.58
SFT1YKL006C-A UBP5P39944 805 aa5.17□□□□□ -1.58
SFT1YKL006C-A RPN3P40016 523 aaKnown RBP5.17□□□□□ -1.58
SFT1YKL006C-A NIT1P40447 199 aa5.17□□□□□ -1.58
SFT1YKL006C-A YOR352WQ08816 343 aa5.17□□□□□ -1.58
SFT1YKL006C-A YER152CP10356 443 aa5.16□□□□□ -1.58
SFT1YKL006C-A MNR2P35724 969 aa5.16□□□□□ -1.58
SFT1YKL006C-A PIK1P39104 1066 aa5.16□□□□□ -1.58
SFT1YKL006C-A MRPL22P53881 309 aa5.16□□□□□ -1.58
SFT1YKL006C-A TIF35Q04067 274 aaKnown RBP5.16□□□□□ -1.58
SFT1YKL006C-A CDC34P14682 295 aa5.15□□□□□ -1.59
SFT1YKL006C-A BAP2P38084 609 aa5.15□□□□□ -1.59
SFT1YKL006C-A HNT2P49775 206 aa5.15□□□□□ -1.59
SFT1YKL006C-A SEC26P41810 973 aaKnown RBP5.14□□□□□ -1.59
SFT1YKL006C-A TYW3P53177 273 aa5.14□□□□□ -1.59
SFT1YKL006C-A CWC24P53769 259 aa5.14□□□□□ -1.59
SFT1YKL006C-A SNO2P53823 222 aa5.14□□□□□ -1.59
SFT1YKL006C-A SNF5P18480 905 aa5.13□□□□□ -1.59
SFT1YKL006C-A LYP1P32487 611 aa5.13□□□□□ -1.59
SFT1YKL006C-A MPH1P40562 993 aa5.13□□□□□ -1.59
SFT1YKL006C-A MAD1P40957 749 aa5.13□□□□□ -1.59
SFT1YKL006C-A YFL054CP43549 646 aa5.13□□□□□ -1.59
SFT1YKL006C-A ENV11P53246 860 aa5.13□□□□□ -1.59
SFT1YKL006C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SFT1YKL006C-A JIP5Q06214 492 aaPredicted RBP5.13□□□□□ -1.59
SFT1YKL006C-A YDL177CQ12257 170 aa5.13□□□□□ -1.59
SFT1YKL006C-A TRP2P00899 507 aaKnown RBP5.12□□□□□ -1.59
SFT1YKL006C-A NAP1P25293 417 aaKnown RBP5.12□□□□□ -1.59
SFT1YKL006C-A DUT1P33317 147 aa5.12□□□□□ -1.59
SFT1YKL006C-A MOT2P34909 587 aaKnown RBP5.12□□□□□ -1.59
SFT1YKL006C-A SPP382Q06411 708 aaPredicted RBP5.12□□□□□ -1.59
SFT1YKL006C-A CDA2Q06703 312 aa5.12□□□□□ -1.59
SFT1YKL006C-A INO1P11986 533 aa5.11□□□□□ -1.59
SFT1YKL006C-A CLN2P20438 545 aa5.11□□□□□ -1.59
SFT1YKL006C-A RFC5P38251 354 aa5.11□□□□□ -1.59
SFT1YKL006C-A AIM3P38266 947 aaKnown RBP5.11□□□□□ -1.59
SFT1YKL006C-A MXR1P40029 184 aa5.11□□□□□ -1.59
SFT1YKL006C-A GDE1Q02979 1223 aa5.11□□□□□ -1.59
SFT1YKL006C-A RSM24Q03976 319 aa5.11□□□□□ -1.59
SFT1YKL006C-A SPO20Q04359 397 aa5.11□□□□□ -1.59
SFT1YKL006C-A GNT1Q12096 491 aa5.11□□□□□ -1.59
SFT1YKL006C-A BAS1P22035 811 aa5.1□□□□□ -1.59
SFT1YKL006C-A TSA1P34760 196 aaKnown RBP5.1□□□□□ -1.59
SFT1YKL006C-A MET10P39692 1035 aa5.1□□□□□ -1.59
SFT1YKL006C-A EEB1Q02891 456 aa5.1□□□□□ -1.59
SFT1YKL006C-A YLR225CQ05948 407 aaKnown RBP5.1□□□□□ -1.59
SFT1YKL006C-A SVS1Q12254 260 aa5.1□□□□□ -1.59
SFT1YKL006C-A CYC1P00044 109 aaPredicted RBP5.09□□□□□ -1.59
SFT1YKL006C-A RPL11AP0C0W9 174 aaKnown RBP5.09□□□□□ -1.59
SFT1YKL006C-A YGL176CP46945 554 aa5.09□□□□□ -1.59
SFT1YKL006C-A SNU71P53207 620 aaKnown RBP5.09□□□□□ -1.59
SFT1YKL006C-A MAP1Q01662 387 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
SFT1YKL006C-A SVF1Q05515 481 aa5.09□□□□□ -1.59
SFT1YKL006C-A RPL11BQ3E757 174 aaPredicted RBP5.09□□□□□ -1.59
SFT1YKL006C-A KIN2P13186 1147 aaKnown RBP5.08□□□□□ -1.6
SFT1YKL006C-A APL1P27351 700 aa5.08□□□□□ -1.6
SFT1YKL006C-A YKL107WP34251 309 aa5.08□□□□□ -1.6
SFT1YKL006C-A UGA2P38067 497 aa5.08□□□□□ -1.6
SFT1YKL006C-A GEM1P39722 662 aa5.08□□□□□ -1.6
SFT1YKL006C-A FAA4P47912 694 aaKnown RBP5.08□□□□□ -1.6
SFT1YKL006C-A SGD1Q06132 899 aa5.08□□□□□ -1.6
SFT1YKL006C-A RKM4Q12504 494 aa5.08□□□□□ -1.6
SFT1YKL006C-A RPS13P05756 151 aaKnown RBP5.07□□□□□ -1.6
SFT1YKL006C-A PRP6P19735 899 aaPredicted RBP5.07□□□□□ -1.6
SFT1YKL006C-A SNF7P39929 240 aaKnown RBP5.07□□□□□ -1.6
SFT1YKL006C-A KRI1P42846 591 aaKnown RBP5.07□□□□□ -1.6
SFT1YKL006C-A YGR053CP53234 283 aa5.07□□□□□ -1.6
SFT1YKL006C-A ROT1Q03691 256 aa5.07□□□□□ -1.6
SFT1YKL006C-A ACM1Q08981 209 aa5.07□□□□□ -1.6
SFT1YKL006C-A YPL277CQ08989 487 aa5.07□□□□□ -1.6
SFT1YKL006C-A THS1P04801 734 aaKnown RBP5.06□□□□□ -1.6
SFT1YKL006C-A CMP2P14747 604 aa5.06□□□□□ -1.6
SFT1YKL006C-A DBP2P24783 546 aaKnown RBP5.06□□□□□ -1.6
SFT1YKL006C-A TOD6P34219 525 aa5.06□□□□□ -1.6
SFT1YKL006C-A ABZ1P37254 787 aaPredicted RBP5.06□□□□□ -1.6
SFT1YKL006C-A RIM8P53179 542 aa5.06□□□□□ -1.6
SFT1YKL006C-A LAM1P38851 1228 aa5.05□□□□□ -1.6
SFT1YKL006C-A PNT1P38969 423 aa5.05□□□□□ -1.6
SFT1YKL006C-A FAL1Q12099 399 aaKnown RBP5.05□□□□□ -1.6
SFT1YKL006C-A SOD2P00447 233 aa5.04□□□□□ -1.6
SFT1YKL006C-A PIN4P34217 668 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SFT1YKL006C-A THI80P35202 319 aa5.04□□□□□ -1.6
SFT1YKL006C-A MEF2P39677 819 aa5.04□□□□□ -1.6
SFT1YKL006C-A SPT20P50875 604 aa5.04□□□□□ -1.6
SFT1YKL006C-A VPS16Q03308 798 aa5.04□□□□□ -1.6
SFT1YKL006C-A VTS1Q08831 523 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SFT1YKL006C-A PIN2Q12057 282 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms