RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W SMC6Q12749 1114 aa9.11□□□□□ -0.95
GGA2YHR108W RPS6AP0CX37 236 aaKnown RBP9.1□□□□□ -0.95
GGA2YHR108W RPS6BP0CX38 236 aaPredicted RBP9.1□□□□□ -0.95
GGA2YHR108W MIP6P38760 659 aaKnown RBP9.1□□□□□ -0.95
GGA2YHR108W UTP7P40055 554 aaKnown RBP9.1□□□□□ -0.95
GGA2YHR108W CBK1P53894 756 aa9.1□□□□□ -0.95
GGA2YHR108W TRM44Q02648 567 aaKnown RBP9.1□□□□□ -0.95
GGA2YHR108W YLH47Q06493 454 aa9.1□□□□□ -0.95
GGA2YHR108W HMI1Q12039 706 aa9.1□□□□□ -0.95
GGA2YHR108W YOL098CQ12496 1037 aa9.1□□□□□ -0.95
GGA2YHR108W MIP1P15801 1254 aa9.09□□□□□ -0.95
GGA2YHR108W YKL091CP33324 310 aaKnown RBP9.09□□□□□ -0.95
GGA2YHR108W SHM1P37292 490 aaPredicted RBP9.09□□□□□ -0.95
GGA2YHR108W ORC6P38826 435 aa9.09□□□□□ -0.95
GGA2YHR108W BUL2Q03758 920 aaKnown RBP9.09□□□□□ -0.95
GGA2YHR108W YAP7Q08182 245 aa9.09□□□□□ -0.95
GGA2YHR108W RRP6Q12149 733 aaKnown RBP9.09□□□□□ -0.95
GGA2YHR108W LTV1P34078 463 aa9.09□□□□□ -0.95
GGA2YHR108W GAA1P39012 614 aa9.09□□□□□ -0.95
GGA2YHR108W MFM1Q02783 413 aa9.09□□□□□ -0.95
GGA2YHR108W AIM33Q04516 312 aa9.09□□□□□ -0.95
GGA2YHR108W SUE1Q06524 206 aa9.09□□□□□ -0.95
GGA2YHR108W RAD53P22216 821 aa9.08□□□□□ -0.96
GGA2YHR108W STO1P34160 861 aaKnown RBP9.08□□□□□ -0.96
GGA2YHR108W STV1P37296 890 aa9.08□□□□□ -0.96
GGA2YHR108W ROG3P43602 733 aa9.08□□□□□ -0.96
GGA2YHR108W CAF130P53280 1122 aaPredicted RBP9.08□□□□□ -0.96
GGA2YHR108W YGR273CP53329 174 aa9.08□□□□□ -0.96
GGA2YHR108W ERG5P54781 538 aa9.08□□□□□ -0.96
GGA2YHR108W UTP5Q04177 643 aaKnown RBP9.08□□□□□ -0.96
GGA2YHR108W UTP4Q06679 776 aaKnown RBP9.08□□□□□ -0.96
GGA2YHR108W ATG20Q07528 640 aa9.08□□□□□ -0.96
GGA2YHR108W YOL075CQ08234 1294 aa9.08□□□□□ -0.96
GGA2YHR108W TUB2P02557 457 aaKnown RBP9.07□□□□□ -0.96
GGA2YHR108W SEC23P15303 768 aaKnown RBP9.07□□□□□ -0.96
GGA2YHR108W ISY1P21374 235 aaPredicted RBP9.07□□□□□ -0.96
GGA2YHR108W UBC1P21734 215 aaKnown RBP9.07□□□□□ -0.96
GGA2YHR108W NDC80P40460 691 aa9.07□□□□□ -0.96
GGA2YHR108W VPS4P52917 437 aa9.07□□□□□ -0.96
GGA2YHR108W RPC25P35718 212 aa9.07□□□□□ -0.96
GGA2YHR108W SUL1P38359 859 aa9.07□□□□□ -0.96
GGA2YHR108W PAN5P38787 379 aa9.07□□□□□ -0.96
GGA2YHR108W SEC9P40357 651 aa9.07□□□□□ -0.96
GGA2YHR108W OXR1Q08952 273 aa9.07□□□□□ -0.96
GGA2YHR108W YPL216WQ08964 1102 aa9.07□□□□□ -0.96
GGA2YHR108W MCM16Q12262 181 aa9.07□□□□□ -0.96
GGA2YHR108W ILV1P00927 576 aaKnown RBP9.06□□□□□ -0.96
GGA2YHR108W ERG12P07277 443 aa9.06□□□□□ -0.96
GGA2YHR108W YEL076C-AP0CX16 216 aa9.06□□□□□ -0.96
GGA2YHR108W YLR464WP0CX17 216 aa9.06□□□□□ -0.96
GGA2YHR108W MTF2P10849 440 aa9.06□□□□□ -0.96
GGA2YHR108W YEL076CP39971 216 aa9.06□□□□□ -0.96
GGA2YHR108W VFA1P40080 203 aa9.06□□□□□ -0.96
GGA2YHR108W ATG3P40344 310 aa9.06□□□□□ -0.96
GGA2YHR108W SHQ1P40486 507 aaPredicted RBP9.06□□□□□ -0.96
GGA2YHR108W PRP31P49704 494 aaPredicted RBP9.06□□□□□ -0.96
GGA2YHR108W SOL4P53315 255 aa9.06□□□□□ -0.96
GGA2YHR108W SPO75Q07798 868 aa9.06□□□□□ -0.96
GGA2YHR108W PLP2Q12017 286 aa9.06□□□□□ -0.96
GGA2YHR108W STE11P23561 717 aa9.05□□□□□ -0.96
GGA2YHR108W RPC53P25441 422 aa9.05□□□□□ -0.96
GGA2YHR108W DPB3P27344 201 aa9.05□□□□□ -0.96
GGA2YHR108W RAM2P29703 316 aa9.05□□□□□ -0.96
GGA2YHR108W ISW1P38144 1129 aa9.05□□□□□ -0.96
GGA2YHR108W PPS1P38148 807 aa9.05□□□□□ -0.96
GGA2YHR108W KEL1P38853 1164 aaKnown RBP9.05□□□□□ -0.96
GGA2YHR108W YAP5P40574 245 aa9.05□□□□□ -0.96
GGA2YHR108W EMP47P43555 445 aa9.05□□□□□ -0.96
GGA2YHR108W FMS1P50264 508 aa9.05□□□□□ -0.96
GGA2YHR108W HFM1P51979 1187 aa9.05□□□□□ -0.96
GGA2YHR108W OYE2Q03558 400 aaKnown RBP9.05□□□□□ -0.96
GGA2YHR108W SML1Q04964 104 aa9.05□□□□□ -0.96
GGA2YHR108W NEW1Q08972 1196 aaKnown RBP9.05□□□□□ -0.96
GGA2YHR108W NOP14Q99207 810 aaKnown RBP9.05□□□□□ -0.96
GGA2YHR108W MAK16P10962 306 aaPredicted RBP9.04□□□□□ -0.96
GGA2YHR108W SPO12P17123 173 aa9.04□□□□□ -0.96
GGA2YHR108W GLC3P32775 704 aa9.04□□□□□ -0.96
GGA2YHR108W MCX1P38323 520 aaPredicted RBP9.04□□□□□ -0.96
GGA2YHR108W TIF4631P39935 952 aaKnown RBP9.04□□□□□ -0.96
GGA2YHR108W NIT1P40447 199 aa9.04□□□□□ -0.96
GGA2YHR108W TOS3P43637 560 aa9.04□□□□□ -0.96
GGA2YHR108W UME1Q03010 460 aa9.04□□□□□ -0.96
GGA2YHR108W CWC2Q12046 339 aaPredicted RBP9.04□□□□□ -0.96
GGA2YHR108W CBP1P07252 654 aa9.04□□□□□ -0.96
GGA2YHR108W HPR1P17629 752 aaKnown RBP9.04□□□□□ -0.96
GGA2YHR108W YEL043WP32618 956 aa9.04□□□□□ -0.96
GGA2YHR108W SPT21P35209 758 aa9.04□□□□□ -0.96
GGA2YHR108W REI1P38344 393 aaPredicted RBP9.04□□□□□ -0.96
GGA2YHR108W SIP3P38717 1229 aa9.04□□□□□ -0.96
GGA2YHR108W SMC2P38989 1170 aaKnown RBP9.04□□□□□ -0.96
GGA2YHR108W CCC2P38995 1004 aa9.04□□□□□ -0.96
GGA2YHR108W NUP82P40368 713 aa9.04□□□□□ -0.96
GGA2YHR108W GUP1P53154 560 aa9.04□□□□□ -0.96
GGA2YHR108W PGA2P53903 129 aa9.04□□□□□ -0.96
GGA2YHR108W SEC5P89102 971 aa9.04□□□□□ -0.96
GGA2YHR108W RBA50Q04418 439 aa9.04□□□□□ -0.96
GGA2YHR108W OPY2Q06810 360 aa9.04□□□□□ -0.96
GGA2YHR108W RRP1P35178 278 aaPredicted RBP9.03□□□□□ -0.96
GGA2YHR108W TPS3P38426 1054 aaKnown RBP9.03□□□□□ -0.96
GGA2YHR108W YFL034WP43564 1073 aa9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms