RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM27, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM27	YGR215W	MET10	P39692	1035 aa		5.77	□□□□□ -1.49
RSM27	YGR215W	VAC8	P39968	578 aa		5.77	□□□□□ -1.49
RSM27	YGR215W	NOP7	P53261	605 aa	Known RBP	5.77	□□□□□ -1.49
RSM27	YGR215W	ALD6	P54115	500 aa	Known RBP	5.77	□□□□□ -1.49
RSM27	YGR215W	SAM35	P14693	329 aa		5.76	□□□□□ -1.49
RSM27	YGR215W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
RSM27	YGR215W	ADP1	P25371	1049 aa		5.76	□□□□□ -1.49
RSM27	YGR215W	LYP1	P32487	611 aa		5.76	□□□□□ -1.49
RSM27	YGR215W	RGD1	P38339	666 aa		5.76	□□□□□ -1.49
RSM27	YGR215W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	RIP-Chip
RSM27	YGR215W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
RSM27	YGR215W	YPL260W	Q08977	551 aa		5.76	□□□□□ -1.49
RSM27	YGR215W	YER152C	P10356	443 aa		5.75	□□□□□ -1.49
RSM27	YGR215W	INO1	P11986	533 aa		5.75	□□□□□ -1.49
RSM27	YGR215W	PRI2	P20457	528 aa		5.75	□□□□□ -1.49
RSM27	YGR215W	AIM26	P32858	118 aa		5.75	□□□□□ -1.49
RSM27	YGR215W	YFL054C	P43549	646 aa		5.75	□□□□□ -1.49
RSM27	YGR215W	YLR225C	Q05948	407 aa	Known RBP	5.75	□□□□□ -1.49
RSM27	YGR215W	ESC2	Q06340	456 aa		5.75	□□□□□ -1.49
RSM27	YGR215W	RCL1	Q08096	367 aa	Predicted RBP	5.75	□□□□□ -1.49
RSM27	YGR215W	FAL1	Q12099	399 aa	Known RBP	5.75	□□□□□ -1.49
RSM27	YGR215W	COQ4	O13525	335 aa		5.74	□□□□□ -1.49
RSM27	YGR215W	BAS1	P22035	811 aa		5.74	□□□□□ -1.49
RSM27	YGR215W	MPH1	P40562	993 aa		5.74	□□□□□ -1.49
RSM27	YGR215W	YGR053C	P53234	283 aa		5.74	□□□□□ -1.49
RSM27	YGR215W	HOS3	Q02959	697 aa	Known RBP	5.74	□□□□□ -1.49
RSM27	YGR215W	MDL2	P33311	773 aa		5.73	□□□□□ -1.49
RSM27	YGR215W	HSP78	P33416	811 aa		5.73	□□□□□ -1.49
RSM27	YGR215W	POL12	P38121	705 aa	Predicted RBP	5.73	□□□□□ -1.49
RSM27	YGR215W	HNT2	P49775	206 aa		5.73	□□□□□ -1.49
RSM27	YGR215W	TNA1	P53322	534 aa		5.73	□□□□□ -1.49
RSM27	YGR215W	SPO20	Q04359	397 aa		5.73	□□□□□ -1.49
RSM27	YGR215W	ABD1	P32783	436 aa	Predicted RBP	5.72	□□□□□ -1.49
RSM27	YGR215W	YGL176C	P46945	554 aa		5.72	□□□□□ -1.49
RSM27	YGR215W	YPL066W	Q12194	479 aa		5.72	□□□□□ -1.49
RSM27	YGR215W	CCZ1	P38273	704 aa		5.71	□□□□□ -1.5
RSM27	YGR215W	RSB1	Q08417	382 aa		5.71	□□□□□ -1.5
RSM27	YGR215W	SRO9	P25567	434 aa	Known RBP	5.7	□□□□□ -1.5
RSM27	YGR215W	YKL107W	P34251	309 aa		5.7	□□□□□ -1.5
RSM27	YGR215W	LRG1	P35688	1017 aa		5.7	□□□□□ -1.5
RSM27	YGR215W	YKL069W	P36088	180 aa		5.7	□□□□□ -1.5
RSM27	YGR215W	RPN3	P40016	523 aa	Known RBP	5.7	□□□□□ -1.5
RSM27	YGR215W	SPP382	Q06411	708 aa	Predicted RBP	5.7	□□□□□ -1.5
RSM27	YGR215W	RSC58	Q07979	502 aa		5.7	□□□□□ -1.5
RSM27	YGR215W	NBA1	Q08229	501 aa	Known RBP	5.7	□□□□□ -1.5
RSM27	YGR215W	GNT1	Q12096	491 aa		5.7	□□□□□ -1.5
RSM27	YGR215W	LPX1	Q12405	387 aa	Known RBP	5.7	□□□□□ -1.5
RSM27	YGR215W	MXR1	P40029	184 aa		5.69	□□□□□ -1.5
RSM27	YGR215W	OPI10	Q08202	246 aa		5.69	□□□□□ -1.5
RSM27	YGR215W	RKM4	Q12504	494 aa		5.69	□□□□□ -1.5
RSM27	YGR215W	SPS1	P08458	490 aa		5.68	□□□□□ -1.5
RSM27	YGR215W	SNF5	P18480	905 aa		5.68	□□□□□ -1.5
RSM27	YGR215W	RPL11A	P0C0W9	174 aa	Known RBP	5.67	□□□□□ -1.5
RSM27	YGR215W	DBP2	P24783	546 aa	Known RBP	5.67	□□□□□ -1.5
RSM27	YGR215W	ETP1	P38748	585 aa	Known RBP	5.67	□□□□□ -1.5
RSM27	YGR215W	PIK1	P39104	1066 aa		5.67	□□□□□ -1.5
RSM27	YGR215W	FOL2	P51601	243 aa	Known RBP	5.67	□□□□□ -1.5
RSM27	YGR215W	RPL11B	Q3E757	174 aa	Predicted RBP	5.67	□□□□□ -1.5
RSM27	YGR215W	DFG16	Q99234	619 aa		5.67	□□□□□ -1.5
RSM27	YGR215W	BAP2	P38084	609 aa		5.66	□□□□□ -1.5
RSM27	YGR215W	UGA2	P38067	497 aa		5.65	□□□□□ -1.5
RSM27	YGR215W	MBP1	P39678	833 aa		5.65	□□□□□ -1.5
RSM27	YGR215W	AVT1	P47082	602 aa		5.65	□□□□□ -1.5
RSM27	YGR215W	WRS1	Q12109	432 aa	Known RBP	5.65	□□□□□ -1.5
RSM27	YGR215W	SEG2	P34250	1132 aa		5.64	□□□□□ -1.51
RSM27	YGR215W	SIP5	P40210	489 aa	Known RBP	5.64	□□□□□ -1.51
RSM27	YGR215W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
RSM27	YGR215W	TDA5	Q06417	326 aa	Known RBP	5.64	□□□□□ -1.51
RSM27	YGR215W	ACM1	Q08981	209 aa		5.64	□□□□□ -1.51
RSM27	YGR215W	AGP1	P25376	633 aa		5.63	□□□□□ -1.51
RSM27	YGR215W	SBA1	P28707	216 aa	Known RBP	5.63	□□□□□ -1.51
RSM27	YGR215W	VBA5	P36172	582 aa		5.63	□□□□□ -1.51
RSM27	YGR215W	PNT1	P38969	423 aa		5.63	□□□□□ -1.51
RSM27	YGR215W	ORC3	P54790	616 aa		5.63	□□□□□ -1.51
RSM27	YGR215W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
RSM27	YGR215W	KRI1	P42846	591 aa	Known RBP	5.62	□□□□□ -1.51
RSM27	YGR215W	SSF2	Q12153	453 aa	Predicted RBP	5.62	□□□□□ -1.51
RSM27	YGR215W	YDL177C	Q12257	170 aa		5.62	□□□□□ -1.51
RSM27	YGR215W	BI4	P03879	638 aa		5.61	□□□□□ -1.51
RSM27	YGR215W	GAS1	P22146	559 aa	Known RBP	5.61	□□□□□ -1.51
RSM27	YGR215W	SLA2	P33338	968 aa		5.61	□□□□□ -1.51
RSM27	YGR215W	SNF7	P39929	240 aa	Known RBP	5.61	□□□□□ -1.51
RSM27	YGR215W	SEC26	P41810	973 aa	Known RBP	5.61	□□□□□ -1.51
RSM27	YGR215W	ECL1	P48235	211 aa		5.61	□□□□□ -1.51
RSM27	YGR215W	SVS1	Q12254	260 aa		5.61	□□□□□ -1.51
RSM27	YGR215W	ABZ1	P37254	787 aa	Predicted RBP	5.6	□□□□□ -1.51
RSM27	YGR215W	RFC5	P38251	354 aa		5.6	□□□□□ -1.51
RSM27	YGR215W	GEM1	P39722	662 aa		5.6	□□□□□ -1.51
RSM27	YGR215W	SPF1	P39986	1215 aa	Known RBP	5.6	□□□□□ -1.51
RSM27	YGR215W	RNQ1	P25367	405 aa		5.59	□□□□□ -1.51
RSM27	YGR215W	GRX1	P25373	110 aa	Known RBP	5.59	□□□□□ -1.51
RSM27	YGR215W	APL1	P27351	700 aa		5.58	□□□□□ -1.52
RSM27	YGR215W	STE5	P32917	917 aa		5.58	□□□□□ -1.52
RSM27	YGR215W	MRPL22	P53881	309 aa		5.58	□□□□□ -1.52
RSM27	YGR215W	SHE9	Q04172	456 aa		5.58	□□□□□ -1.52
RSM27	YGR215W	CYC1	P00044	109 aa	Predicted RBP	5.57	□□□□□ -1.52
RSM27	YGR215W	MRP8	P35719	219 aa		5.57	□□□□□ -1.52
RSM27	YGR215W	YBR184W	P38299	523 aa		5.57	□□□□□ -1.52
RSM27	YGR215W	SAH1	P39954	449 aa	Known RBP	5.57	□□□□□ -1.52
RSM27	YGR215W	RSM24	Q03976	319 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 562 ms