RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W VMA4P22203 233 aaKnown RBP3.04□□□□□ -1.92
SMD1YGR074W MSH3P25336 1018 aa3.04□□□□□ -1.92
SMD1YGR074W PPG1P32838 368 aa3.04□□□□□ -1.92
SMD1YGR074W MDL2P33311 773 aa3.04□□□□□ -1.92
SMD1YGR074W DUR3P33413 735 aa3.04□□□□□ -1.92
SMD1YGR074W SHM2P37291 469 aaKnown RBP3.04□□□□□ -1.92
SMD1YGR074W BRN1P38170 754 aa3.04□□□□□ -1.92
SMD1YGR074W YHL012WP38709 493 aa3.04□□□□□ -1.92
SMD1YGR074W HSE1P38753 452 aa3.04□□□□□ -1.92
SMD1YGR074W NMD2P38798 1089 aaKnown RBP3.04□□□□□ -1.92
SMD1YGR074W XKS1P42826 600 aa3.04□□□□□ -1.92
SMD1YGR074W MTR4P47047 1073 aaKnown RBP3.04□□□□□ -1.92
SMD1YGR074W CLU1Q03690 1277 aaKnown RBP3.04□□□□□ -1.92
SMD1YGR074W TDA5Q06417 326 aaKnown RBP3.04□□□□□ -1.92
SMD1YGR074W BAS1P22035 811 aa3.03□□□□□ -1.92
SMD1YGR074W GRX1P25373 110 aaKnown RBP3.03□□□□□ -1.92
SMD1YGR074W SCT1P32784 759 aa3.03□□□□□ -1.92
SMD1YGR074W PIC2P40035 300 aa3.03□□□□□ -1.92
SMD1YGR074W FAA4P47912 694 aaKnown RBP3.03□□□□□ -1.92
SMD1YGR074W NOG1Q02892 647 aaKnown RBP3.03□□□□□ -1.92
SMD1YGR074W NAN1Q02931 896 aaKnown RBP3.03□□□□□ -1.92
SMD1YGR074W SPO75Q07798 868 aa3.03□□□□□ -1.92
SMD1YGR074W LAP2Q10740 671 aa3.03□□□□□ -1.92
SMD1YGR074W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SMD1YGR074W PRE10P21242 288 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
SMD1YGR074W RET1P22276 1149 aaKnown RBP3.02□□□□□ -1.93
SMD1YGR074W AIM26P32858 118 aa3.02□□□□□ -1.93
SMD1YGR074W MPT5P39016 859 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93 RIP-Chip
SMD1YGR074W YAR028WP39548 234 aa3.02□□□□□ -1.93
SMD1YGR074W ENT3P47160 408 aa3.02□□□□□ -1.93
SMD1YGR074W YGL140CP53120 1219 aa3.02□□□□□ -1.93
SMD1YGR074W TYW3P53177 273 aa3.02□□□□□ -1.93
SMD1YGR074W YGR053CP53234 283 aa3.02□□□□□ -1.93
SMD1YGR074W ENV11P53246 860 aa3.02□□□□□ -1.93
SMD1YGR074W NSE3Q05541 303 aa3.02□□□□□ -1.93
SMD1YGR074W OPI10Q08202 246 aa3.02□□□□□ -1.93
SMD1YGR074W HRK1Q08732 759 aaKnown RBP3.02□□□□□ -1.93
SMD1YGR074W OSH2Q12451 1283 aa3.02□□□□□ -1.93
SMD1YGR074W DED1P06634 604 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W TY1A-LR4P0C2I8 440 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W TY1A-DR6P0CX70 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-ER1P0CX71 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-LR2P0CX72 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-PLP0CX73 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-JR1P0CX74 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-LR3P0CX75 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-ML2P0CX76 440 aa3.01□□□□□ -1.93
SMD1YGR074W SAM35P14693 329 aa3.01□□□□□ -1.93
SMD1YGR074W SEC23P15303 768 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W RRP14P36080 434 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W TIM54P47045 478 aa3.01□□□□□ -1.93
SMD1YGR074W RNH70P53331 553 aa3.01□□□□□ -1.93
SMD1YGR074W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SMD1YGR074W YLR257WQ06146 321 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W TY1A-GR1Q12085 440 aa3.01□□□□□ -1.93
SMD1YGR074W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W TY1A-OLQ92392 440 aaKnown RBP3.01□□□□□ -1.93
SMD1YGR074W SRO9P25567 434 aaKnown RBP3□□□□□ -1.93
SMD1YGR074W CTS1P29029 562 aa3□□□□□ -1.93
SMD1YGR074W LYP1P32487 611 aa3□□□□□ -1.93
SMD1YGR074W MRP8P35719 219 aa3□□□□□ -1.93
SMD1YGR074W ADD66P36040 267 aa3□□□□□ -1.93
SMD1YGR074W NMD3P38861 518 aaKnown RBP3□□□□□ -1.93
SMD1YGR074W TAT2P38967 592 aa3□□□□□ -1.93
SMD1YGR074W SLS1P42900 643 aa3□□□□□ -1.93
SMD1YGR074W SIW14P53965 281 aa3□□□□□ -1.93
SMD1YGR074W EST2Q06163 884 aa3□□□□□ -1.93
SMD1YGR074W NBA1Q08229 501 aaKnown RBP3□□□□□ -1.93
SMD1YGR074W TRP2P00899 507 aaKnown RBP2.99□□□□□ -1.93
SMD1YGR074W SPS1P08458 490 aa2.99□□□□□ -1.93
SMD1YGR074W RAD4P14736 754 aa2.99□□□□□ -1.93
SMD1YGR074W AGP1P25376 633 aa2.99□□□□□ -1.93
SMD1YGR074W DUT1P33317 147 aa2.99□□□□□ -1.93
SMD1YGR074W PIN4P34217 668 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SMD1YGR074W MCM7P38132 845 aa2.99□□□□□ -1.93
SMD1YGR074W EXO5P38289 585 aa2.99□□□□□ -1.93
SMD1YGR074W SPF1P39986 1215 aaKnown RBP2.99□□□□□ -1.93
SMD1YGR074W SNM1P40993 198 aa2.99□□□□□ -1.93
SMD1YGR074W IOC3P43596 787 aa2.99□□□□□ -1.93
SMD1YGR074W HNT2P49775 206 aa2.99□□□□□ -1.93
SMD1YGR074W SPT20P50875 604 aa2.99□□□□□ -1.93
SMD1YGR074W HUL5P53119 910 aa2.99□□□□□ -1.93
SMD1YGR074W YGR125WP53273 1036 aa2.99□□□□□ -1.93
SMD1YGR074W YNR063WP53749 607 aa2.99□□□□□ -1.93
SMD1YGR074W RPN4Q03465 531 aa2.99□□□□□ -1.93
SMD1YGR074W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SMD1YGR074W MET6P05694 767 aaKnown RBP2.98□□□□□ -1.93
SMD1YGR074W HSP60P19882 572 aaKnown RBP2.98□□□□□ -1.93
SMD1YGR074W SYP1P25623 870 aaKnown RBP2.98□□□□□ -1.93
SMD1YGR074W MKK2P32491 506 aa2.98□□□□□ -1.93
SMD1YGR074W RER2P35196 286 aa2.98□□□□□ -1.93
SMD1YGR074W FPR3P38911 411 aaKnown RBP2.98□□□□□ -1.93
SMD1YGR074W CHZ1P40019 153 aaPredicted RBP2.98□□□□□ -1.93
SMD1YGR074W IRR1P40541 1150 aa2.98□□□□□ -1.93
SMD1YGR074W HUL4P40985 892 aa2.98□□□□□ -1.93
SMD1YGR074W DOS2P54858 310 aa2.98□□□□□ -1.93
SMD1YGR074W ROD1Q02805 837 aa2.98□□□□□ -1.93
SMD1YGR074W RKM2Q03942 479 aa2.98□□□□□ -1.93
SMD1YGR074W SHE9Q04172 456 aa2.98□□□□□ -1.93
SMD1YGR074W UTP5Q04177 643 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms