RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W SPT5P27692 1063 aaKnown RBP6.89□□□□□ -1.31
RPN11YFR004W RRN6P32786 894 aa6.89□□□□□ -1.31
RPN11YFR004W SIS2P36024 562 aa6.89□□□□□ -1.31
RPN11YFR004W MNN4P36044 1178 aa6.89□□□□□ -1.31
RPN11YFR004W CIC1P38779 376 aaKnown RBP6.89□□□□□ -1.31
RPN11YFR004W RIM21P48565 533 aa6.89□□□□□ -1.31
RPN11YFR004W UBR2Q07963 1872 aa6.88□□□□□ -1.31
RPN11YFR004W PEP12P32854 288 aa6.88□□□□□ -1.31
RPN11YFR004W BCK2P33306 851 aa6.88□□□□□ -1.31
RPN11YFR004W KTR2P33550 425 aa6.88□□□□□ -1.31
RPN11YFR004W NPL4P33755 580 aa6.88□□□□□ -1.31
RPN11YFR004W PRX1P34227 261 aaKnown RBP6.88□□□□□ -1.31
RPN11YFR004W VRP1P37370 817 aa6.88□□□□□ -1.31
RPN11YFR004W RSM25P40496 264 aa6.88□□□□□ -1.31
RPN11YFR004W VID28P40547 921 aa6.88□□□□□ -1.31
RPN11YFR004W HYR1P40581 163 aaKnown RBP6.88□□□□□ -1.31
RPN11YFR004W ARP5P53946 755 aa6.88□□□□□ -1.31
RPN11YFR004W CTR9P89105 1077 aa6.88□□□□□ -1.31
RPN11YFR004W MAK16P10962 306 aaPredicted RBP6.87□□□□□ -1.31
RPN11YFR004W MIP1P15801 1254 aa6.87□□□□□ -1.31
RPN11YFR004W SRM1P21827 482 aa6.87□□□□□ -1.31
RPN11YFR004W MCM2P29469 868 aa6.87□□□□□ -1.31
RPN11YFR004W TGL4P36165 910 aa6.87□□□□□ -1.31
RPN11YFR004W YHR131CP38835 850 aa6.87□□□□□ -1.31
RPN11YFR004W PTK2P47116 818 aaKnown RBP6.87□□□□□ -1.31
RPN11YFR004W PEX14P53112 341 aa6.87□□□□□ -1.31
RPN11YFR004W SKG3Q06315 1026 aa6.87□□□□□ -1.31
RPN11YFR004W TFB4Q12004 338 aa6.87□□□□□ -1.31
RPN11YFR004W YRR1Q12172 810 aa6.87□□□□□ -1.31
RPN11YFR004W CDC19P00549 500 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W CPA2P03965 1118 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W HEM1P09950 548 aaPredicted RBP6.86□□□□□ -1.31
RPN11YFR004W FRS2P15625 503 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W YKR018CP36114 725 aa6.86□□□□□ -1.31
RPN11YFR004W GRS1P38088 690 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W YMR147WP40218 223 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W SPO22P40511 975 aa6.86□□□□□ -1.31
RPN11YFR004W PIL1P53252 339 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W YGR125WP53273 1036 aa6.86□□□□□ -1.31
RPN11YFR004W KRE33P53914 1056 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W ALD6P54115 500 aaKnown RBP6.86□□□□□ -1.31
RPN11YFR004W YPL260WQ08977 551 aa6.86□□□□□ -1.31
RPN11YFR004W TPM1P17536 199 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W MBR1P23493 339 aa6.85□□□□□ -1.31
RPN11YFR004W EBP2P36049 427 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W MIC60P36112 540 aa6.85□□□□□ -1.31
RPN11YFR004W TOM71P38825 639 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W NOC2P39744 710 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W CCT5P40413 562 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W BUL2Q03758 920 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W TOR2P32600 2474 aaKnown RBP6.85□□□□□ -1.31
RPN11YFR004W IMP2'P32351 346 aa6.84□□□□□ -1.31
RPN11YFR004W SRP40P32583 406 aaPredicted RBP6.84□□□□□ -1.31
RPN11YFR004W UTR4P32626 227 aa6.84□□□□□ -1.31
RPN11YFR004W SOL4P53315 255 aa6.84□□□□□ -1.31
RPN11YFR004W SSL2Q00578 843 aa6.84□□□□□ -1.31
RPN11YFR004W TRS33Q99394 268 aa6.84□□□□□ -1.31
RPN11YFR004W PDR1P12383 1068 aa6.83□□□□□ -1.32
RPN11YFR004W RDS2P19541 446 aaKnown RBP6.83□□□□□ -1.32
RPN11YFR004W RDS1P25611 832 aa6.83□□□□□ -1.32
RPN11YFR004W NPR3P38742 1146 aa6.83□□□□□ -1.32
RPN11YFR004W SKP2P42843 763 aa6.83□□□□□ -1.32
RPN11YFR004W IOC3P43596 787 aa6.83□□□□□ -1.32
RPN11YFR004W YML082WQ04533 649 aaKnown RBP6.83□□□□□ -1.32
RPN11YFR004W ESF1Q06344 628 aaKnown RBP6.83□□□□□ -1.32
RPN11YFR004W ELG1Q12050 791 aa6.83□□□□□ -1.32
RPN11YFR004W YDR524C-BQ3E6R4 66 aa6.83□□□□□ -1.32
RPN11YFR004W LAM4P38800 1345 aa6.82□□□□□ -1.32
RPN11YFR004W PDC1P06169 563 aaKnown RBP6.82□□□□□ -1.32
RPN11YFR004W OSH3P38713 996 aaKnown RBP6.82□□□□□ -1.32
RPN11YFR004W YKE2P52553 114 aa6.82□□□□□ -1.32
RPN11YFR004W YNR014WP53719 212 aa6.82□□□□□ -1.32
RPN11YFR004W TOR1P35169 2470 aa6.81□□□□□ -1.32
RPN11YFR004W SES1P07284 462 aaKnown RBP6.81□□□□□ -1.32
RPN11YFR004W RAD18P10862 487 aa6.81□□□□□ -1.32
RPN11YFR004W YUR1P26725 428 aa6.81□□□□□ -1.32
RPN11YFR004W PEP3P27801 918 aa6.81□□□□□ -1.32
RPN11YFR004W IRE1P32361 1115 aa6.81□□□□□ -1.32
RPN11YFR004W FBP26P32604 452 aa6.81□□□□□ -1.32
RPN11YFR004W MRPL10P36520 322 aa6.81□□□□□ -1.32
RPN11YFR004W EPL1P43572 832 aa6.81□□□□□ -1.32
RPN11YFR004W IRC8P47046 822 aa6.81□□□□□ -1.32
RPN11YFR004W FOL2P51601 243 aaKnown RBP6.81□□□□□ -1.32
RPN11YFR004W VMS1Q04311 632 aaKnown RBP6.81□□□□□ -1.32
RPN11YFR004W MOT1P32333 1867 aa6.81□□□□□ -1.32
RPN11YFR004W OPI1P21957 404 aa6.8□□□□□ -1.32
RPN11YFR004W CHS3P29465 1165 aa6.8□□□□□ -1.32
RPN11YFR004W ELM1P32801 640 aa6.8□□□□□ -1.32
RPN11YFR004W TIM23P32897 222 aa6.8□□□□□ -1.32
RPN11YFR004W RFC5P38251 354 aa6.8□□□□□ -1.32
RPN11YFR004W PHO88P38264 188 aaPredicted RBP6.8□□□□□ -1.32
RPN11YFR004W YHL017WP38745 532 aa6.8□□□□□ -1.32
RPN11YFR004W BUD6P41697 788 aa6.8□□□□□ -1.32
RPN11YFR004W RSC8P43609 557 aaKnown RBP6.8□□□□□ -1.32
RPN11YFR004W TCB2P48231 1178 aa6.8□□□□□ -1.32
RPN11YFR004W KAR5Q04746 504 aa6.8□□□□□ -1.32
RPN11YFR004W PSK2Q08217 1101 aa6.8□□□□□ -1.32
RPN11YFR004W MSC6Q08818 692 aaKnown RBP6.8□□□□□ -1.32
RPN11YFR004W YPL150WQ12152 901 aa6.8□□□□□ -1.32
RPN11YFR004W MATALPHA2P0CY08 210 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms