RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C RGR1P19263 1082 aa6.46□□□□□ -1.38
SEC20YDR498C ADP1P25371 1049 aa6.46□□□□□ -1.38
SEC20YDR498C ASF1P32447 279 aa6.46□□□□□ -1.38
SEC20YDR498C SIS2P36024 562 aa6.46□□□□□ -1.38
SEC20YDR498C STT3P39007 718 aaKnown RBP6.46□□□□□ -1.38
SEC20YDR498C ATG32P40458 529 aa6.46□□□□□ -1.38
SEC20YDR498C DAK2P43550 591 aa6.46□□□□□ -1.38
SEC20YDR498C ALG2P43636 503 aa6.46□□□□□ -1.38
SEC20YDR498C YOR296WQ08748 1289 aa6.46□□□□□ -1.38
SEC20YDR498C AFT2Q08957 416 aa6.46□□□□□ -1.38
SEC20YDR498C YLR278CQ05854 1341 aa6.46□□□□□ -1.38
SEC20YDR498C HIS4P00815 799 aaKnown RBP6.45□□□□□ -1.38
SEC20YDR498C PDR1P12383 1068 aa6.45□□□□□ -1.38
SEC20YDR498C RAD53P22216 821 aa6.45□□□□□ -1.38
SEC20YDR498C PSE1P32337 1089 aaKnown RBP6.45□□□□□ -1.38
SEC20YDR498C HIR1P32479 840 aa6.45□□□□□ -1.38
SEC20YDR498C MNR2P35724 969 aa6.45□□□□□ -1.38
SEC20YDR498C VRP1P37370 817 aa6.45□□□□□ -1.38
SEC20YDR498C YBL028CP38202 106 aa6.45□□□□□ -1.38
SEC20YDR498C LEO1P38439 464 aa6.45□□□□□ -1.38
SEC20YDR498C TOM71P38825 639 aaKnown RBP6.45□□□□□ -1.38
SEC20YDR498C NOC2P39744 710 aaKnown RBP6.45□□□□□ -1.38
SEC20YDR498C TIF4631P39935 952 aaKnown RBP6.45□□□□□ -1.38
SEC20YDR498C RET3P53600 189 aa6.45□□□□□ -1.38
SEC20YDR498C FAR11P53917 953 aa6.45□□□□□ -1.38
SEC20YDR498C TRS120Q04183 1289 aa6.45□□□□□ -1.38
SEC20YDR498C LAA1P39526 2014 aa6.44□□□□□ -1.38
SEC20YDR498C RPL22AP05749 121 aaKnown RBP6.44□□□□□ -1.38
SEC20YDR498C CYC8P14922 966 aa6.44□□□□□ -1.38
SEC20YDR498C KRS1P15180 591 aaKnown RBP6.44□□□□□ -1.38
SEC20YDR498C BCK2P33306 851 aa6.44□□□□□ -1.38
SEC20YDR498C CCT3P39077 534 aaKnown RBP6.44□□□□□ -1.38
SEC20YDR498C FET4P40988 552 aa6.44□□□□□ -1.38
SEC20YDR498C THI6P41835 540 aa6.44□□□□□ -1.38
SEC20YDR498C AIP1P46680 615 aaKnown RBP6.44□□□□□ -1.38
SEC20YDR498C YGR237CP50089 785 aa6.44□□□□□ -1.38
SEC20YDR498C YPR109WQ06104 294 aa6.44□□□□□ -1.38
SEC20YDR498C SMD2Q06217 110 aaKnown RBP6.44□□□□□ -1.38
SEC20YDR498C PSR2Q07949 397 aa6.44□□□□□ -1.38
SEC20YDR498C YOL075CQ08234 1294 aa6.44□□□□□ -1.38
SEC20YDR498C APL4Q12028 832 aa6.44□□□□□ -1.38
SEC20YDR498C CEX1Q12453 761 aa6.44□□□□□ -1.38
SEC20YDR498C MOT1P32333 1867 aa6.44□□□□□ -1.38
SEC20YDR498C PMA1P05030 918 aaKnown RBP6.43□□□□□ -1.38
SEC20YDR498C PHR1P05066 565 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
SEC20YDR498C CBP1P07252 654 aa6.43□□□□□ -1.38
SEC20YDR498C THR4P16120 514 aaKnown RBP6.43□□□□□ -1.38
SEC20YDR498C HPR1P17629 752 aaKnown RBP6.43□□□□□ -1.38
SEC20YDR498C CDC15P27636 974 aa6.43□□□□□ -1.38
SEC20YDR498C CST26P38226 397 aa6.43□□□□□ -1.38
SEC20YDR498C BRE2P43132 505 aa6.43□□□□□ -1.38
SEC20YDR498C CTR1P49573 406 aa6.43□□□□□ -1.38
SEC20YDR498C YGR117CP53270 476 aa6.43□□□□□ -1.38
SEC20YDR498C ADY4Q05955 493 aa6.43□□□□□ -1.38
SEC20YDR498C LAP2Q10740 671 aa6.43□□□□□ -1.38
SEC20YDR498C TIP41Q12199 356 aa6.43□□□□□ -1.38
SEC20YDR498C TOM1Q03280 3268 aa6.42□□□□□ -1.38
SEC20YDR498C TUF1P02992 437 aaKnown RBP6.42□□□□□ -1.38
SEC20YDR498C YEL076C-AP0CX16 216 aa6.42□□□□□ -1.38
SEC20YDR498C YLR464WP0CX17 216 aa6.42□□□□□ -1.38
SEC20YDR498C GLC3P32775 704 aa6.42□□□□□ -1.38
SEC20YDR498C YET1P35723 206 aa6.42□□□□□ -1.38
SEC20YDR498C PET10P36139 283 aa6.42□□□□□ -1.38
SEC20YDR498C PAN5P38787 379 aa6.42□□□□□ -1.38
SEC20YDR498C RTT107P38850 1070 aa6.42□□□□□ -1.38
SEC20YDR498C GAA1P39012 614 aa6.42□□□□□ -1.38
SEC20YDR498C YEL076CP39971 216 aa6.42□□□□□ -1.38
SEC20YDR498C UBA2P52488 636 aa6.42□□□□□ -1.38
SEC20YDR498C SQS1P53866 767 aaKnown RBP6.42□□□□□ -1.38
SEC20YDR498C AIM33Q04516 312 aa6.42□□□□□ -1.38
SEC20YDR498C YML082WQ04533 649 aaKnown RBP6.42□□□□□ -1.38
SEC20YDR498C CRF1Q04930 467 aa6.42□□□□□ -1.38
SEC20YDR498C SLK19Q08581 821 aaKnown RBP6.42□□□□□ -1.38
SEC20YDR498C PDC1P06169 563 aaKnown RBP6.41□□□□□ -1.38
SEC20YDR498C PHO13P19881 312 aa6.41□□□□□ -1.38
SEC20YDR498C ISY1P21374 235 aaPredicted RBP6.41□□□□□ -1.38
SEC20YDR498C MSM1P22438 575 aa6.41□□□□□ -1.38
SEC20YDR498C SAC6P32599 642 aaKnown RBP6.41□□□□□ -1.38
SEC20YDR498C PCH2P38126 564 aa6.41□□□□□ -1.38
SEC20YDR498C BCD1P38772 366 aa6.41□□□□□ -1.38
SEC20YDR498C DSE4P53753 1117 aa6.41□□□□□ -1.38
SEC20YDR498C UTP4Q06679 776 aaKnown RBP6.41□□□□□ -1.38
SEC20YDR498C YPL216WQ08964 1102 aa6.41□□□□□ -1.38
SEC20YDR498C CLF1Q12309 687 aaPredicted RBP6.41□□□□□ -1.38
SEC20YDR498C NBL1Q3E7Y6 73 aa6.41□□□□□ -1.38
SEC20YDR498C RPS6AP0CX37 236 aaKnown RBP6.4□□□□□ -1.38
SEC20YDR498C RPS6BP0CX38 236 aaPredicted RBP6.4□□□□□ -1.38
SEC20YDR498C PSO2P30620 661 aa6.4□□□□□ -1.38
SEC20YDR498C ADE17P38009 592 aaKnown RBP6.4□□□□□ -1.38
SEC20YDR498C VPS45P38932 577 aa6.4□□□□□ -1.38
SEC20YDR498C CCC2P38995 1004 aa6.4□□□□□ -1.38
SEC20YDR498C VPS75P53853 264 aa6.4□□□□□ -1.38
SEC20YDR498C VIP1Q06685 1146 aaKnown RBP6.4□□□□□ -1.38
SEC20YDR498C YDL057WQ07379 328 aa6.4□□□□□ -1.38
SEC20YDR498C WHI4Q07655 649 aaKnown RBP6.4□□□□□ -1.38
SEC20YDR498C CSR2Q12734 1121 aa6.4□□□□□ -1.38
SEC20YDR498C FOB1O13329 566 aa6.39□□□□□ -1.39
SEC20YDR498C MIP1P15801 1254 aa6.39□□□□□ -1.39
SEC20YDR498C RAM1P22007 431 aa6.39□□□□□ -1.39
SEC20YDR498C SEC65P29478 273 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms