RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeastyeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP4YDR354W AVT1P47082 602 aa7□□□□□ -1.29
TRP4YDR354W UBP3Q01477 912 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
TRP4YDR354W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
TRP4YDR354W COQ4O13525 335 aa6.99□□□□□ -1.29
TRP4YDR354W TRP2P00899 507 aaKnown RBP6.99□□□□□ -1.29
TRP4YDR354W YER152CP10356 443 aa6.99□□□□□ -1.29
TRP4YDR354W MCM7P38132 845 aa6.99□□□□□ -1.29
TRP4YDR354W MET10P39692 1035 aa6.99□□□□□ -1.29
TRP4YDR354W MPH1P40562 993 aa6.99□□□□□ -1.29
TRP4YDR354W YFL054CP43549 646 aa6.99□□□□□ -1.29
TRP4YDR354W TNA1P53322 534 aa6.99□□□□□ -1.29
TRP4YDR354W LYP1P32487 611 aa6.98□□□□□ -1.29
TRP4YDR354W SEG2P34250 1132 aa6.98□□□□□ -1.29
TRP4YDR354W MOT2P34909 587 aaKnown RBP6.98□□□□□ -1.29
TRP4YDR354W FAA4P47912 694 aaKnown RBP6.98□□□□□ -1.29
TRP4YDR354W ORC3P54790 616 aa6.98□□□□□ -1.29
TRP4YDR354W RSC58Q07979 502 aa6.98□□□□□ -1.29
TRP4YDR354W SNF5P18480 905 aa6.97□□□□□ -1.29
TRP4YDR354W PUF4P25339 888 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
TRP4YDR354W MAD1P40957 749 aa6.97□□□□□ -1.29
TRP4YDR354W BAP2P38084 609 aa6.96□□□□□ -1.3
TRP4YDR354W RPN3P40016 523 aaKnown RBP6.96□□□□□ -1.3
TRP4YDR354W HNT2P49775 206 aa6.96□□□□□ -1.3
TRP4YDR354W TYW3P53177 273 aa6.96□□□□□ -1.3
TRP4YDR354W GDE1Q02979 1223 aa6.96□□□□□ -1.3
TRP4YDR354W VPS16Q03308 798 aa6.96□□□□□ -1.3
TRP4YDR354W SVF1Q05515 481 aa6.96□□□□□ -1.3
TRP4YDR354W NBA1Q08229 501 aaKnown RBP6.96□□□□□ -1.3
TRP4YDR354W INO1P11986 533 aa6.95□□□□□ -1.3
TRP4YDR354W CCZ1P38273 704 aa6.95□□□□□ -1.3
TRP4YDR354W PIN2Q12057 282 aa6.95□□□□□ -1.3
TRP4YDR354W CLN2P20438 545 aa6.94□□□□□ -1.3
TRP4YDR354W ETP1P38748 585 aaKnown RBP6.94□□□□□ -1.3
TRP4YDR354W ECL1P48235 211 aa6.94□□□□□ -1.3
TRP4YDR354W YGR053CP53234 283 aa6.94□□□□□ -1.3
TRP4YDR354W CWC24P53769 259 aa6.94□□□□□ -1.3
TRP4YDR354W PAM1P37304 830 aaKnown RBP6.93□□□□□ -1.3
TRP4YDR354W PIK1P39104 1066 aa6.93□□□□□ -1.3
TRP4YDR354W FOL2P51601 243 aaKnown RBP6.93□□□□□ -1.3
TRP4YDR354W YLR225CQ05948 407 aaKnown RBP6.93□□□□□ -1.3
TRP4YDR354W RSB1Q08417 382 aa6.93□□□□□ -1.3
TRP4YDR354W SPS1P08458 490 aa6.92□□□□□ -1.3
TRP4YDR354W NAP1P25293 417 aaKnown RBP6.92□□□□□ -1.3
TRP4YDR354W MXR1P40029 184 aa6.92□□□□□ -1.3
TRP4YDR354W ESC2Q06340 456 aa6.92□□□□□ -1.3
TRP4YDR354W GNT1Q12096 491 aa6.92□□□□□ -1.3
TRP4YDR354W YPL066WQ12194 479 aa6.92□□□□□ -1.3
TRP4YDR354W YDL177CQ12257 170 aa6.92□□□□□ -1.3
TRP4YDR354W RNQ1P25367 405 aa6.91□□□□□ -1.3
TRP4YDR354W GAS1P22146 559 aaKnown RBP6.9□□□□□ -1.3
TRP4YDR354W DBP2P24783 546 aaKnown RBP6.9□□□□□ -1.3
TRP4YDR354W YGL176CP46945 554 aa6.9□□□□□ -1.3
TRP4YDR354W SPO20Q04359 397 aa6.9□□□□□ -1.3
TRP4YDR354W RPL11AP0C0W9 174 aaKnown RBP6.89□□□□□ -1.31
TRP4YDR354W BAS1P22035 811 aa6.89□□□□□ -1.31
TRP4YDR354W ABD1P32783 436 aaPredicted RBP6.89□□□□□ -1.31
TRP4YDR354W ELM1P32801 640 aa6.89□□□□□ -1.31
TRP4YDR354W SPP382Q06411 708 aaPredicted RBP6.89□□□□□ -1.31
TRP4YDR354W RPL11BQ3E757 174 aaPredicted RBP6.89□□□□□ -1.31
TRP4YDR354W YKL107WP34251 309 aa6.88□□□□□ -1.31
TRP4YDR354W VAC8P39968 578 aa6.88□□□□□ -1.31
TRP4YDR354W ALD6P54115 500 aaKnown RBP6.88□□□□□ -1.31
TRP4YDR354W FAL1Q12099 399 aaKnown RBP6.88□□□□□ -1.31
TRP4YDR354W RKM4Q12504 494 aa6.88□□□□□ -1.31
TRP4YDR354W PRI2P20457 528 aa6.87□□□□□ -1.31
TRP4YDR354W ABZ1P37254 787 aaPredicted RBP6.87□□□□□ -1.31
TRP4YDR354W TSA1P34760 196 aaKnown RBP6.86□□□□□ -1.31
TRP4YDR354W PNT1P38969 423 aa6.86□□□□□ -1.31
TRP4YDR354W IRC24P40580 263 aa6.86□□□□□ -1.31
TRP4YDR354W SEC26P41810 973 aaKnown RBP6.86□□□□□ -1.31
TRP4YDR354W MRPL22P53881 309 aa6.86□□□□□ -1.31
TRP4YDR354W CDA2Q06703 312 aa6.86□□□□□ -1.31
TRP4YDR354W UGA2P38067 497 aa6.85□□□□□ -1.31
TRP4YDR354W SIP5P40210 489 aaKnown RBP6.85□□□□□ -1.31
TRP4YDR354W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
TRP4YDR354W OPI10Q08202 246 aa6.85□□□□□ -1.31
TRP4YDR354W YKL069WP36088 180 aa6.84□□□□□ -1.31
TRP4YDR354W NIT1P40447 199 aa6.84□□□□□ -1.31
TRP4YDR354W PRP43P53131 767 aaKnown RBP6.84□□□□□ -1.31
TRP4YDR354W ACM1Q08981 209 aa6.84□□□□□ -1.31
TRP4YDR354W SVS1Q12254 260 aa6.84□□□□□ -1.31
TRP4YDR354W SLA2P33338 968 aa6.83□□□□□ -1.32
TRP4YDR354W BI4P03879 638 aa6.82□□□□□ -1.32
TRP4YDR354W RFC5P38251 354 aa6.82□□□□□ -1.32
TRP4YDR354W GEM1P39722 662 aa6.82□□□□□ -1.32
TRP4YDR354W SNO2P53823 222 aa6.82□□□□□ -1.32
TRP4YDR354W CYC1P00044 109 aaPredicted RBP6.81□□□□□ -1.32
TRP4YDR354W AGP1P25376 633 aa6.81□□□□□ -1.32
TRP4YDR354W AIM3P38266 947 aaKnown RBP6.81□□□□□ -1.32
TRP4YDR354W SBA1P28707 216 aaKnown RBP6.8□□□□□ -1.32
TRP4YDR354W PIN4P34217 668 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
TRP4YDR354W MBP1P39678 833 aa6.8□□□□□ -1.32
TRP4YDR354W RSM24Q03976 319 aa6.8□□□□□ -1.32
TRP4YDR354W APL1P27351 700 aa6.79□□□□□ -1.32
TRP4YDR354W ENV11P53246 860 aa6.79□□□□□ -1.32
TRP4YDR354W ATG13Q06628 738 aa6.79□□□□□ -1.32
TRP4YDR354W RIB2Q12362 591 aaKnown RBP6.79□□□□□ -1.32
TRP4YDR354W CMP2P14747 604 aa6.78□□□□□ -1.32
TRP4YDR354W VBA5P36172 582 aa6.78□□□□□ -1.32
TRP4YDR354W UBP5P39944 805 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms