RNA–Protein interactions for RNA: YDR247W

VHS1, Transcript of Cytoplasmic serine/threonine protein kinase, yeastyeast

Gene VHS1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS1YDR247W SPO14P36126 1683 aa6.83□□□□□ -1.32
VHS1YDR247W DED1P06634 604 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W TY1A-LR4P0C2I8 440 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W TY1A-DR6P0CX70 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-ER1P0CX71 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-LR2P0CX72 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-PLP0CX73 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-JR1P0CX74 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-LR3P0CX75 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-ML2P0CX76 440 aa6.82□□□□□ -1.32
VHS1YDR247W PAF1P38351 445 aa6.82□□□□□ -1.32
VHS1YDR247W UTP22P53254 1237 aaPredicted RBP6.82□□□□□ -1.32
VHS1YDR247W YGR125WP53273 1036 aa6.82□□□□□ -1.32
VHS1YDR247W ADE12P80210 433 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W EST2Q06163 884 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-GR1Q12085 440 aa6.82□□□□□ -1.32
VHS1YDR247W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W TY1A-OLQ92392 440 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W TIM23P32897 222 aa6.82□□□□□ -1.32
VHS1YDR247W STE5P32917 917 aa6.82□□□□□ -1.32
VHS1YDR247W VBA5P36172 582 aa6.82□□□□□ -1.32
VHS1YDR247W SEA4P38164 1038 aa6.82□□□□□ -1.32
VHS1YDR247W IRR1P40541 1150 aa6.82□□□□□ -1.32
VHS1YDR247W HAS1Q03532 505 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W YLR225CQ05948 407 aaKnown RBP6.82□□□□□ -1.32
VHS1YDR247W ESC2Q06340 456 aa6.82□□□□□ -1.32
VHS1YDR247W YIG1Q08956 461 aa6.82□□□□□ -1.32
VHS1YDR247W YLR125WQ12138 136 aa6.82□□□□□ -1.32
VHS1YDR247W NUP157P40064 1391 aaKnown RBP6.81□□□□□ -1.32
VHS1YDR247W CFT1Q06632 1357 aaKnown RBP6.81□□□□□ -1.32
VHS1YDR247W PHO8P11491 566 aa6.81□□□□□ -1.32
VHS1YDR247W GAL11P19659 1081 aa6.81□□□□□ -1.32
VHS1YDR247W MKK2P32491 506 aa6.81□□□□□ -1.32
VHS1YDR247W NEM1P38757 446 aa6.81□□□□□ -1.32
VHS1YDR247W RSP5P39940 809 aaKnown RBP6.81□□□□□ -1.32
VHS1YDR247W LEM3P42838 414 aa6.81□□□□□ -1.32
VHS1YDR247W FMP25Q08023 583 aa6.81□□□□□ -1.32
VHS1YDR247W TY3B-IQ7LHG5 1498 aaKnown RBP6.81□□□□□ -1.32
VHS1YDR247W HSP60P19882 572 aaKnown RBP6.8□□□□□ -1.32
VHS1YDR247W SYP1P25623 870 aaKnown RBP6.8□□□□□ -1.32
VHS1YDR247W RPL8BP29453 256 aaKnown RBP6.8□□□□□ -1.32
VHS1YDR247W ADD66P36040 267 aa6.8□□□□□ -1.32
VHS1YDR247W ATG14P38270 344 aa6.8□□□□□ -1.32
VHS1YDR247W GGA2P38817 585 aaKnown RBP6.8□□□□□ -1.32
VHS1YDR247W CEM1P39525 442 aa6.8□□□□□ -1.32
VHS1YDR247W LYS5P50113 272 aa6.8□□□□□ -1.32
VHS1YDR247W UTP5Q04177 643 aaKnown RBP6.8□□□□□ -1.32
VHS1YDR247W PDS5Q04264 1277 aa6.8□□□□□ -1.32
VHS1YDR247W YOR093CQ12275 1648 aa6.8□□□□□ -1.32
VHS1YDR247W YSP2Q06681 1438 aa6.79□□□□□ -1.32
VHS1YDR247W CIT1P00890 479 aa6.79□□□□□ -1.32
VHS1YDR247W INO1P11986 533 aa6.79□□□□□ -1.32
VHS1YDR247W MET22P32179 357 aa6.79□□□□□ -1.32
VHS1YDR247W MOT2P34909 587 aaKnown RBP6.79□□□□□ -1.32
VHS1YDR247W ARL1P38116 183 aaKnown RBP6.79□□□□□ -1.32
VHS1YDR247W PBY1P38254 753 aa6.79□□□□□ -1.32
VHS1YDR247W MNN1P39106 762 aa6.79□□□□□ -1.32
VHS1YDR247W SNF7P39929 240 aaKnown RBP6.79□□□□□ -1.32
VHS1YDR247W SLS1P42900 643 aa6.79□□□□□ -1.32
VHS1YDR247W ERP6P53198 216 aa6.79□□□□□ -1.32
VHS1YDR247W LCB5Q06147 687 aaKnown RBP6.79□□□□□ -1.32
VHS1YDR247W SBP1P10080 294 aaKnown RBP6.78□□□□□ -1.32
VHS1YDR247W GAR1P28007 205 aaKnown RBP6.78□□□□□ -1.32
VHS1YDR247W SOK2P53438 785 aaPredicted RBP6.78□□□□□ -1.32
VHS1YDR247W TIF35Q04067 274 aaKnown RBP6.78□□□□□ -1.32
VHS1YDR247W EAF1Q06337 982 aa6.78□□□□□ -1.32
VHS1YDR247W SYT1Q06836 1226 aa6.78□□□□□ -1.32
VHS1YDR247W RKM4Q12504 494 aa6.78□□□□□ -1.32
VHS1YDR247W LTE1P07866 1435 aa6.77□□□□□ -1.33
VHS1YDR247W DBP5P20449 482 aaKnown RBP6.77□□□□□ -1.33
VHS1YDR247W GBP2P25555 427 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
VHS1YDR247W ARE1P25628 610 aa6.77□□□□□ -1.33
VHS1YDR247W PIN4P34217 668 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
VHS1YDR247W CNN1P43618 361 aa6.77□□□□□ -1.33
VHS1YDR247W RAT1Q02792 1006 aaKnown RBP6.77□□□□□ -1.33
VHS1YDR247W SPO71Q03868 1245 aa6.77□□□□□ -1.33
VHS1YDR247W RKM2Q03942 479 aa6.77□□□□□ -1.33
VHS1YDR247W YDR444WQ04093 687 aa6.77□□□□□ -1.33
VHS1YDR247W UTP14Q04500 899 aaKnown RBP6.77□□□□□ -1.33
VHS1YDR247W THI4P32318 326 aa6.76□□□□□ -1.33
VHS1YDR247W YKL107WP34251 309 aa6.76□□□□□ -1.33
VHS1YDR247W PFD1P46988 109 aa6.76□□□□□ -1.33
VHS1YDR247W GCV1P48015 400 aa6.76□□□□□ -1.33
VHS1YDR247W MEC3Q02574 474 aa6.76□□□□□ -1.33
VHS1YDR247W YGR161W-CQ3E744 92 aa6.76□□□□□ -1.33
VHS1YDR247W CAN1P04817 590 aa6.75□□□□□ -1.33
VHS1YDR247W PRP9P19736 530 aaKnown RBP6.75□□□□□ -1.33
VHS1YDR247W MCM7P38132 845 aa6.75□□□□□ -1.33
VHS1YDR247W FUN12P39730 1002 aaKnown RBP6.75□□□□□ -1.33
VHS1YDR247W HUL4P40985 892 aa6.75□□□□□ -1.33
VHS1YDR247W AOS1Q06624 347 aa6.75□□□□□ -1.33
VHS1YDR247W YRF1-1P0CX20 1796 aa6.75□□□□□ -1.33
VHS1YDR247W YRF1-5P0CX21 1796 aa6.75□□□□□ -1.33
VHS1YDR247W YRF1-8P0CX22 1796 aa6.75□□□□□ -1.33
VHS1YDR247W ERR1P0CX10 437 aa6.74□□□□□ -1.33
VHS1YDR247W ERR2P0CX11 437 aa6.74□□□□□ -1.33
VHS1YDR247W REI1P38344 393 aaPredicted RBP6.74□□□□□ -1.33
VHS1YDR247W GIP2P40036 548 aa6.74□□□□□ -1.33
VHS1YDR247W YGL176CP46945 554 aa6.74□□□□□ -1.33
VHS1YDR247W UTP8P53276 713 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms