RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTP1	YDL230W	PES4	P39684	611 aa		13.66	□□□□□ -0.22
PTP1	YDL230W	OXR1	Q08952	273 aa		13.66	□□□□□ -0.22
PTP1	YDL230W	YOL098C	Q12496	1037 aa		13.66	□□□□□ -0.22
PTP1	YDL230W	MIP1	P15801	1254 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	GSY1	P23337	708 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	YKL091C	P33324	310 aa	Known RBP	13.65	□□□□□ -0.22
PTP1	YDL230W	GAA1	P39012	614 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	APT1	P49435	187 aa	Known RBP	13.65	□□□□□ -0.22
PTP1	YDL230W	CBK1	P53894	756 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	VPS38	Q05919	439 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	UTP4	Q06679	776 aa	Known RBP	13.65	□□□□□ -0.22
PTP1	YDL230W	ATG20	Q07528	640 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	YAP7	Q08182	245 aa		13.65	□□□□□ -0.22
PTP1	YDL230W	YEL076C-A	P0CX16	216 aa		13.64	□□□□□ -0.23
PTP1	YDL230W	YLR464W	P0CX17	216 aa		13.64	□□□□□ -0.23
PTP1	YDL230W	ISY1	P21374	235 aa	Predicted RBP	13.64	□□□□□ -0.23
PTP1	YDL230W	RAD53	P22216	821 aa		13.64	□□□□□ -0.23
PTP1	YDL230W	YEL076C	P39971	216 aa		13.64	□□□□□ -0.23
PTP1	YDL230W	SEC9	P40357	651 aa		13.64	□□□□□ -0.23
PTP1	YDL230W	CAF130	P53280	1122 aa	Predicted RBP	13.64	□□□□□ -0.23
PTP1	YDL230W	RRP6	Q12149	733 aa	Known RBP	13.64	□□□□□ -0.23
PTP1	YDL230W	KRS1	P15180	591 aa	Known RBP	13.63	□□□□□ -0.23
PTP1	YDL230W	HFM1	P51979	1187 aa		13.63	□□□□□ -0.23
PTP1	YDL230W	AAD16	Q02895	342 aa		13.63	□□□□□ -0.23
PTP1	YDL230W	VPS60	Q03390	229 aa		13.63	□□□□□ -0.23
PTP1	YDL230W	HMI1	Q12039	706 aa		13.63	□□□□□ -0.23
PTP1	YDL230W	CWC2	Q12046	339 aa	Predicted RBP	13.63	□□□□□ -0.23
PTP1	YDL230W	UBC1	P21734	215 aa	Known RBP	13.62	□□□□□ -0.23
PTP1	YDL230W	STO1	P34160	861 aa	Known RBP	13.62	□□□□□ -0.23
PTP1	YDL230W	PAN5	P38787	379 aa		13.62	□□□□□ -0.23
PTP1	YDL230W	ATG3	P40344	310 aa		13.62	□□□□□ -0.23
PTP1	YDL230W	SNU71	P53207	620 aa	Known RBP	13.62	□□□□□ -0.23
PTP1	YDL230W	LSB1	P53281	241 aa		13.62	□□□□□ -0.23
PTP1	YDL230W	YLH47	Q06493	454 aa		13.62	□□□□□ -0.23
PTP1	YDL230W	MCM16	Q12262	181 aa		13.62	□□□□□ -0.23
PTP1	YDL230W	SMC6	Q12749	1114 aa		13.62	□□□□□ -0.23
PTP1	YDL230W	SPO12	P17123	173 aa		13.61	□□□□□ -0.23
PTP1	YDL230W	CKA2	P19454	339 aa		13.61	□□□□□ -0.23
PTP1	YDL230W	SUL1	P38359	859 aa		13.61	□□□□□ -0.23
PTP1	YDL230W	CCC2	P38995	1004 aa		13.61	□□□□□ -0.23
PTP1	YDL230W	ILV1	P00927	576 aa	Known RBP	13.6	□□□□□ -0.23
PTP1	YDL230W	CBP1	P07252	654 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	OM45	P16547	393 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	HPR1	P17629	752 aa	Known RBP	13.6	□□□□□ -0.23
PTP1	YDL230W	SEC20	P28791	383 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	RAM2	P29703	316 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	PPS1	P38148	807 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	EFM2	P38347	419 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	CAJ1	P39101	391 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	TIF4631	P39935	952 aa	Known RBP	13.6	□□□□□ -0.23
PTP1	YDL230W	PRP31	P49704	494 aa	Predicted RBP	13.6	□□□□□ -0.23
PTP1	YDL230W	ALF1	P53904	254 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	UME1	Q03010	460 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	BUL2	Q03758	920 aa	Known RBP	13.6	□□□□□ -0.23
PTP1	YDL230W	YLR287C	Q05881	355 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	SPO75	Q07798	868 aa		13.6	□□□□□ -0.23
PTP1	YDL230W	PET111	P08468	800 aa		13.59	□□□□□ -0.23
PTP1	YDL230W	PWP2	P25635	923 aa	Known RBP	13.59	□□□□□ -0.23
PTP1	YDL230W	VFA1	P40080	203 aa		13.59	□□□□□ -0.23
PTP1	YDL230W	FMS1	P50264	508 aa		13.59	□□□□□ -0.23
PTP1	YDL230W	GUP1	P53154	560 aa		13.59	□□□□□ -0.23
PTP1	YDL230W	ERG5	P54781	538 aa		13.59	□□□□□ -0.23
PTP1	YDL230W	SRO9	P25567	434 aa	Known RBP	13.58	□□□□□ -0.24
PTP1	YDL230W	PIH1	P38768	344 aa		13.58	□□□□□ -0.24
PTP1	YDL230W	SHQ1	P40486	507 aa	Predicted RBP	13.58	□□□□□ -0.24
PTP1	YDL230W	EMP47	P43555	445 aa		13.58	□□□□□ -0.24
PTP1	YDL230W	TOS3	P43637	560 aa		13.58	□□□□□ -0.24
PTP1	YDL230W	MTF2	P10849	440 aa		13.57	□□□□□ -0.24
PTP1	YDL230W	LTV1	P34078	463 aa		13.57	□□□□□ -0.24
PTP1	YDL230W	TCD1	P38756	429 aa		13.57	□□□□□ -0.24
PTP1	YDL230W	FET4	P40988	552 aa		13.57	□□□□□ -0.24
PTP1	YDL230W	SQS1	P53866	767 aa	Known RBP	13.57	□□□□□ -0.24
PTP1	YDL230W	PGA2	P53903	129 aa		13.57	□□□□□ -0.24
PTP1	YDL230W	MFM1	Q02783	413 aa		13.57	□□□□□ -0.24
PTP1	YDL230W	SEC23	P15303	768 aa	Known RBP	13.56	□□□□□ -0.24
PTP1	YDL230W	BIM1	P40013	344 aa		13.56	□□□□□ -0.24
PTP1	YDL230W	BRE2	P43132	505 aa		13.56	□□□□□ -0.24
PTP1	YDL230W	FKS1	P38631	1876 aa	Known RBP	13.55	□□□□□ -0.24
PTP1	YDL230W	RPS9B	P05755	195 aa	Known RBP	13.55	□□□□□ -0.24
PTP1	YDL230W	GLC3	P32775	704 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	ISW1	P38144	1129 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	SIP3	P38717	1229 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	ULP2	P40537	1034 aa	Predicted RBP	13.55	□□□□□ -0.24
PTP1	YDL230W	IES1	P43579	692 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	ROG3	P43602	733 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	YGR117C	P53270	476 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	ORC4	P54791	529 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	RRB1	Q04225	511 aa	Known RBP	13.55	□□□□□ -0.24
PTP1	YDL230W	SML1	Q04964	104 aa		13.55	□□□□□ -0.24
PTP1	YDL230W	PPR1	P07272	904 aa	Predicted RBP	13.54	□□□□□ -0.24
PTP1	YDL230W	REI1	P38344	393 aa	Predicted RBP	13.54	□□□□□ -0.24
PTP1	YDL230W	UBP5	P39944	805 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	ACA1	P39970	489 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	NIT1	P40447	199 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	NDC80	P40460	691 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	HUL4	P40985	892 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	BOP3	P53958	396 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	YDL057W	Q07379	328 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	ARP6	Q12509	438 aa		13.54	□□□□□ -0.24
PTP1	YDL230W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 131.6 ms