RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W MDJ2P42834 146 aa3.52□□□□□ -1.85
CDC36YDL165W ULP1Q02724 621 aa3.52□□□□□ -1.85
CDC36YDL165W HEM13P11353 328 aaKnown RBP3.51□□□□□ -1.85
CDC36YDL165W VPS62P53285 467 aa3.51□□□□□ -1.85
CDC36YDL165W PBP1P53297 722 aaKnown RBP3.51□□□□□ -1.85
CDC36YDL165W RPL34AP87262 121 aaPredicted RBP3.51□□□□□ -1.85
CDC36YDL165W YAP6Q03935 383 aa3.51□□□□□ -1.85
CDC36YDL165W NUT2Q06213 157 aa3.51□□□□□ -1.85
CDC36YDL165W RIB2Q12362 591 aaKnown RBP3.51□□□□□ -1.85
CDC36YDL165W PTC5Q12511 572 aa3.51□□□□□ -1.85
CDC36YDL165W DCG1P32460 244 aa3.5□□□□□ -1.85
CDC36YDL165W DEF1P35732 738 aaKnown RBP3.5□□□□□ -1.85
CDC36YDL165W RFC5P38251 354 aa3.5□□□□□ -1.85
CDC36YDL165W MSS4P38994 779 aa3.5□□□□□ -1.85
CDC36YDL165W RPN3P40016 523 aaKnown RBP3.5□□□□□ -1.85
CDC36YDL165W YGL140CP53120 1219 aa3.5□□□□□ -1.85
CDC36YDL165W YLR224WQ05947 369 aa3.5□□□□□ -1.85
CDC36YDL165W EST2Q06163 884 aa3.5□□□□□ -1.85
CDC36YDL165W GTF1P53260 183 aaPredicted RBP3.49□□□□□ -1.85
CDC36YDL165W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
CDC36YDL165W KAR2P16474 682 aaKnown RBP3.48□□□□□ -1.85
CDC36YDL165W EMC1P25574 760 aa3.48□□□□□ -1.85
CDC36YDL165W ALG3P38179 458 aa3.48□□□□□ -1.85
CDC36YDL165W ERP5P38819 212 aa3.48□□□□□ -1.85
CDC36YDL165W DAL4Q04895 635 aa3.48□□□□□ -1.85
CDC36YDL165W PPM2Q08282 695 aa3.48□□□□□ -1.85
CDC36YDL165W YFL054CP43549 646 aa3.47□□□□□ -1.85
CDC36YDL165W HMI1Q12039 706 aa3.47□□□□□ -1.85
CDC36YDL165W KIN2P13186 1147 aaKnown RBP3.46□□□□□ -1.86
CDC36YDL165W SEC23P15303 768 aaKnown RBP3.46□□□□□ -1.86
CDC36YDL165W DAK2P43550 591 aa3.46□□□□□ -1.86
CDC36YDL165W GCV2P49095 1034 aa3.46□□□□□ -1.86
CDC36YDL165W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
CDC36YDL165W YPL260WQ08977 551 aa3.46□□□□□ -1.86
CDC36YDL165W DED1P06634 604 aaKnown RBP3.45□□□□□ -1.86
CDC36YDL165W APL1P27351 700 aa3.45□□□□□ -1.86
CDC36YDL165W OAR1P35731 278 aa3.45□□□□□ -1.86
CDC36YDL165W MOH1P38191 138 aa3.45□□□□□ -1.86
CDC36YDL165W SIP5P40210 489 aaKnown RBP3.45□□□□□ -1.86
CDC36YDL165W SIZ1Q04195 904 aa3.45□□□□□ -1.86
CDC36YDL165W TOS4Q06266 489 aa3.45□□□□□ -1.86
CDC36YDL165W SVS1Q12254 260 aa3.45□□□□□ -1.86
CDC36YDL165W YBL113CQ7M4S9 792 aa3.45□□□□□ -1.86
CDC36YDL165W VPS35P34110 944 aa3.44□□□□□ -1.86
CDC36YDL165W PLB1P39105 664 aa3.44□□□□□ -1.86
CDC36YDL165W YPL109CQ02981 657 aa3.44□□□□□ -1.86
CDC36YDL165W ADI1Q03677 179 aa3.44□□□□□ -1.86
CDC36YDL165W NOP12Q08208 459 aaKnown RBP3.44□□□□□ -1.86
CDC36YDL165W PHO4P07270 312 aaKnown RBP3.42□□□□□ -1.86
CDC36YDL165W GCD6P32501 712 aaKnown RBP3.41□□□□□ -1.86
CDC36YDL165W UBA2P52488 636 aa3.41□□□□□ -1.86
CDC36YDL165W RAT1Q02792 1006 aaKnown RBP3.41□□□□□ -1.86
CDC36YDL165W MSC2Q03455 724 aa3.41□□□□□ -1.86
CDC36YDL165W HRR25P29295 494 aaKnown RBP3.4□□□□□ -1.87
CDC36YDL165W PIC2P40035 300 aa3.4□□□□□ -1.87
CDC36YDL165W SNM1P40993 198 aa3.4□□□□□ -1.87
CDC36YDL165W ATG13Q06628 738 aa3.4□□□□□ -1.87
CDC36YDL165W YER152CP10356 443 aa3.39□□□□□ -1.87
CDC36YDL165W FAA3P39002 694 aa3.39□□□□□ -1.87
CDC36YDL165W ATF1P40353 525 aa3.39□□□□□ -1.87
CDC36YDL165W IOC3P43596 787 aa3.39□□□□□ -1.87
CDC36YDL165W ROD1Q02805 837 aa3.39□□□□□ -1.87
CDC36YDL165W BDF2Q07442 638 aa3.39□□□□□ -1.87
CDC36YDL165W AIM39Q08223 395 aa3.39□□□□□ -1.87
CDC36YDL165W PFK1P16861 987 aaKnown RBP3.38□□□□□ -1.87
CDC36YDL165W CDC3P32457 520 aaKnown RBP3.38□□□□□ -1.87
CDC36YDL165W PEP7P32609 515 aa3.38□□□□□ -1.87
CDC36YDL165W MND2P40577 368 aa3.38□□□□□ -1.87
CDC36YDL165W EXG2P52911 562 aa3.38□□□□□ -1.87
CDC36YDL165W TPO1Q07824 586 aa3.38□□□□□ -1.87
CDC36YDL165W TAF13P11747 167 aa3.37□□□□□ -1.87
CDC36YDL165W RGD1P38339 666 aa3.37□□□□□ -1.87
CDC36YDL165W MET12P46151 657 aa3.37□□□□□ -1.87
CDC36YDL165W ADY3Q07732 790 aa3.37□□□□□ -1.87
CDC36YDL165W OXR1Q08952 273 aa3.37□□□□□ -1.87
CDC36YDL165W MKK2P32491 506 aa3.36□□□□□ -1.87
CDC36YDL165W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
CDC36YDL165W LGE1Q02796 332 aaKnown RBP3.36□□□□□ -1.87
CDC36YDL165W HAT1Q12341 374 aa3.36□□□□□ -1.87
CDC36YDL165W HXK1P04806 485 aaKnown RBP3.35□□□□□ -1.87
CDC36YDL165W HIS5P07172 385 aa3.35□□□□□ -1.87
CDC36YDL165W ACE2P21192 770 aa3.35□□□□□ -1.87
CDC36YDL165W BAS1P22035 811 aa3.35□□□□□ -1.87
CDC36YDL165W YHL050CP38721 697 aa3.35□□□□□ -1.87
CDC36YDL165W YHR219WP38900 624 aa3.35□□□□□ -1.87
CDC36YDL165W CHA4P43634 648 aa3.35□□□□□ -1.87
CDC36YDL165W MLS1P30952 554 aa3.34□□□□□ -1.87
CDC36YDL165W MET4P32389 672 aa3.34□□□□□ -1.87
CDC36YDL165W POA1P38218 177 aa3.34□□□□□ -1.87
CDC36YDL165W QRI1P43123 477 aaKnown RBP3.34□□□□□ -1.87
CDC36YDL165W SIW14P53965 281 aa3.34□□□□□ -1.87
CDC36YDL165W TMN2Q04562 672 aa3.34□□□□□ -1.87
CDC36YDL165W KCS1Q12494 1050 aa3.34□□□□□ -1.87
CDC36YDL165W HFM1P51979 1187 aa3.33□□□□□ -1.88
CDC36YDL165W BI4P03879 638 aa3.32□□□□□ -1.88
CDC36YDL165W SSA1P10591 642 aaKnown RBP3.32□□□□□ -1.88
CDC36YDL165W SYP1P25623 870 aaKnown RBP3.32□□□□□ -1.88
CDC36YDL165W CUE2P36075 443 aaKnown RBP3.32□□□□□ -1.88
CDC36YDL165W UGA2P38067 497 aa3.32□□□□□ -1.88
CDC36YDL165W HXT13P39924 564 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms