RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C DUS3Q06053 668 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C SUE1Q06524 206 aa6.55□□□□□ -1.36
MDH3YDL078C VIP1Q06685 1146 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C MDM20Q12387 796 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C NOP58Q12499 511 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C TKL1P23254 680 aaKnown RBP6.54□□□□□ -1.36
MDH3YDL078C KIC1P38692 1080 aa6.54□□□□□ -1.36
MDH3YDL078C SMC3P47037 1230 aa6.54□□□□□ -1.36
MDH3YDL078C FMS1P50264 508 aa6.54□□□□□ -1.36
MDH3YDL078C LIF1P53150 421 aa6.54□□□□□ -1.36
MDH3YDL078C YNL011CP53980 444 aa6.54□□□□□ -1.36
MDH3YDL078C ECM30Q06673 1274 aa6.54□□□□□ -1.36
MDH3YDL078C ISA1Q07821 250 aaPredicted RBP6.54□□□□□ -1.36
MDH3YDL078C ERP3Q12403 225 aa6.54□□□□□ -1.36
MDH3YDL078C YOR111WQ99210 232 aa6.54□□□□□ -1.36
MDH3YDL078C TIM23P32897 222 aa6.53□□□□□ -1.36
MDH3YDL078C TFC4P33339 1025 aa6.53□□□□□ -1.36
MDH3YDL078C UIP5P36137 443 aa6.53□□□□□ -1.36
MDH3YDL078C KSP1P38691 1029 aaKnown RBP6.53□□□□□ -1.36
MDH3YDL078C SOL3P38858 249 aa6.53□□□□□ -1.36
MDH3YDL078C AIM9P40053 627 aaKnown RBP6.53□□□□□ -1.36
MDH3YDL078C ECM23Q02710 187 aa6.53□□□□□ -1.36
MDH3YDL078C RKM4Q12504 494 aa6.53□□□□□ -1.36
MDH3YDL078C CIT1P00890 479 aa6.52□□□□□ -1.37
MDH3YDL078C RPC31P17890 251 aa6.52□□□□□ -1.37
MDH3YDL078C YUR1P26725 428 aa6.52□□□□□ -1.37
MDH3YDL078C FBP26P32604 452 aa6.52□□□□□ -1.37
MDH3YDL078C BCS1P32839 456 aa6.52□□□□□ -1.37
MDH3YDL078C RAD54P32863 898 aa6.52□□□□□ -1.37
MDH3YDL078C REG2P38232 338 aa6.52□□□□□ -1.37
MDH3YDL078C AKR1P39010 764 aa6.52□□□□□ -1.37
MDH3YDL078C AFG3P39925 761 aa6.52□□□□□ -1.37
MDH3YDL078C VID28P40547 921 aa6.52□□□□□ -1.37
MDH3YDL078C YFL040WP43562 540 aa6.52□□□□□ -1.37
MDH3YDL078C ARP5P53946 755 aa6.52□□□□□ -1.37
MDH3YDL078C FMP30Q02883 468 aa6.52□□□□□ -1.37
MDH3YDL078C YPL034WQ03083 165 aa6.52□□□□□ -1.37
MDH3YDL078C YDR341CQ05506 607 aaKnown RBP6.52□□□□□ -1.37
MDH3YDL078C TRM11Q12463 433 aa6.52□□□□□ -1.37
MDH3YDL078C PHR1P05066 565 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
MDH3YDL078C PDC1P06169 563 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C KEX1P09620 729 aa6.51□□□□□ -1.37
MDH3YDL078C POX1P13711 748 aa6.51□□□□□ -1.37
MDH3YDL078C UGA4P32837 571 aa6.51□□□□□ -1.37
MDH3YDL078C RPS0AP32905 252 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C WHI3P34761 661 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C DBP7P36120 742 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C GUA1P38625 525 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C NDT80P38830 627 aa6.51□□□□□ -1.37
MDH3YDL078C CCT3P39077 534 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C NOC2P39744 710 aaKnown RBP6.51□□□□□ -1.37
MDH3YDL078C FIR1P40020 876 aa6.51□□□□□ -1.37
MDH3YDL078C CLA4P48562 842 aa6.51□□□□□ -1.37
MDH3YDL078C ASE1P50275 885 aa6.51□□□□□ -1.37
MDH3YDL078C YKE2P52553 114 aa6.51□□□□□ -1.37
MDH3YDL078C PTA1Q01329 785 aaPredicted RBP6.51□□□□□ -1.37
MDH3YDL078C TAO3P40468 2376 aa6.51□□□□□ -1.37
MDH3YDL078C MET6P05694 767 aaKnown RBP6.5□□□□□ -1.37
MDH3YDL078C SES1P07284 462 aaKnown RBP6.5□□□□□ -1.37
MDH3YDL078C TRL1P09880 827 aaKnown RBP6.5□□□□□ -1.37
MDH3YDL078C BMH2P34730 273 aaKnown RBP6.5□□□□□ -1.37
MDH3YDL078C GPT2P36148 743 aa6.5□□□□□ -1.37
MDH3YDL078C PAN5P38787 379 aa6.5□□□□□ -1.37
MDH3YDL078C SKP2P42843 763 aa6.5□□□□□ -1.37
MDH3YDL078C YGL039WP53183 348 aaKnown RBP6.5□□□□□ -1.37
MDH3YDL078C PML39Q03760 334 aa6.5□□□□□ -1.37
MDH3YDL078C RLP24Q07915 199 aaKnown RBP6.5□□□□□ -1.37
MDH3YDL078C MATALPHA2P0CY08 210 aa6.49□□□□□ -1.37
MDH3YDL078C HMLALPHA2P0CY09 210 aa6.49□□□□□ -1.37
MDH3YDL078C STI1P15705 589 aaKnown RBP RIP-Chip data6.49□□□□□ -1.37not detected
MDH3YDL078C RXT2P38255 430 aa6.49□□□□□ -1.37
MDH3YDL078C HUL5P53119 910 aa6.49□□□□□ -1.37
MDH3YDL078C GDE1Q02979 1223 aa6.49□□□□□ -1.37
MDH3YDL078C YMR321CQ04898 105 aa6.49□□□□□ -1.37
MDH3YDL078C RNR2P09938 399 aaKnown RBP6.48□□□□□ -1.37
MDH3YDL078C HEM1P09950 548 aaPredicted RBP6.48□□□□□ -1.37
MDH3YDL078C ROX1P25042 368 aa6.48□□□□□ -1.37
MDH3YDL078C SWI4P25302 1093 aaKnown RBP6.48□□□□□ -1.37
MDH3YDL078C VRP1P37370 817 aa6.48□□□□□ -1.37
MDH3YDL078C SUL1P38359 859 aa6.48□□□□□ -1.37
MDH3YDL078C PCI8P40512 444 aa6.48□□□□□ -1.37
MDH3YDL078C EPL1P43572 832 aa6.48□□□□□ -1.37
MDH3YDL078C SCS3P53012 380 aa6.48□□□□□ -1.37
MDH3YDL078C DAK1P54838 584 aaKnown RBP6.48□□□□□ -1.37
MDH3YDL078C ELP4Q02884 456 aaKnown RBP6.48□□□□□ -1.37
MDH3YDL078C EAR1Q03212 550 aa6.48□□□□□ -1.37
MDH3YDL078C OXR1Q08952 273 aa6.48□□□□□ -1.37
MDH3YDL078C ARP6Q12509 438 aa6.48□□□□□ -1.37
MDH3YDL078C RTP1Q12751 981 aa6.48□□□□□ -1.37
MDH3YDL078C YDR461C-AQ2V2P7 80 aa6.48□□□□□ -1.37
MDH3YDL078C SNA3P14359 133 aa6.47□□□□□ -1.37
MDH3YDL078C HCA4P20448 770 aaKnown RBP6.47□□□□□ -1.37
MDH3YDL078C PSE1P32337 1089 aaKnown RBP6.47□□□□□ -1.37
MDH3YDL078C KTR2P33550 425 aa6.47□□□□□ -1.37
MDH3YDL078C SAS3P34218 831 aa6.47□□□□□ -1.37
MDH3YDL078C HMF1P40037 129 aaKnown RBP6.47□□□□□ -1.37
MDH3YDL078C UBP15P50101 1230 aa6.47□□□□□ -1.37
MDH3YDL078C TAN1P53072 289 aaPredicted RBP6.47□□□□□ -1.37
MDH3YDL078C YGL138CP53122 345 aa6.47□□□□□ -1.37
MDH3YDL078C NNF2P53253 936 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 83.8 ms