RNA–Protein interactions for RNA: YBR201W

DER1, Transcript of ER membrane protein that promotes export of misfolded polypeptides, yeast

Gene DER1, Length 636 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DER1	YBR201W	USO1	P25386	1790 aa		4.68	□□□□□ -1.66
DER1	YBR201W	CFT1	Q06632	1357 aa	Known RBP	4.68	□□□□□ -1.66
DER1	YBR201W	PPH3	P32345	308 aa		4.68	□□□□□ -1.66
DER1	YBR201W	AKR1	P39010	764 aa		4.68	□□□□□ -1.66
DER1	YBR201W	MTR4	P47047	1073 aa	Known RBP	4.68	□□□□□ -1.66
DER1	YBR201W	DOT1	Q04089	582 aa	Known RBP	4.68	□□□□□ -1.66
DER1	YBR201W	MSH3	P25336	1018 aa		4.67	□□□□□ -1.66
DER1	YBR201W	PEX13	P80667	386 aa		4.67	□□□□□ -1.66
DER1	YBR201W	ADI1	Q03677	179 aa		4.67	□□□□□ -1.66
DER1	YBR201W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
DER1	YBR201W	AVO1	Q08236	1176 aa		4.67	□□□□□ -1.66
DER1	YBR201W	HXK1	P04806	485 aa	Known RBP	4.66	□□□□□ -1.66
DER1	YBR201W	VMA4	P22203	233 aa	Known RBP	4.66	□□□□□ -1.66
DER1	YBR201W	NAM7	P30771	971 aa	Known RBP	4.66	□□□□□ -1.66
DER1	YBR201W	EXO5	P38289	585 aa		4.66	□□□□□ -1.66
DER1	YBR201W	MRPS18	P42847	217 aa		4.66	□□□□□ -1.66
DER1	YBR201W	YGR122W	P53272	402 aa		4.66	□□□□□ -1.66
DER1	YBR201W	MCD1	Q12158	566 aa		4.66	□□□□□ -1.66
DER1	YBR201W	YLR122C	Q12312	125 aa		4.66	□□□□□ -1.66
DER1	YBR201W	LEU2	P04173	364 aa	Predicted RBP	4.65	□□□□□ -1.67
DER1	YBR201W	MSB1	P21339	1137 aa	Known RBP	4.65	□□□□□ -1.67
DER1	YBR201W	PRE9	P23638	258 aa	Known RBP	4.65	□□□□□ -1.67
DER1	YBR201W	GPT2	P36148	743 aa		4.65	□□□□□ -1.67
DER1	YBR201W	HSE1	P38753	452 aa		4.65	□□□□□ -1.67
DER1	YBR201W	PEX28	P38848	579 aa		4.65	□□□□□ -1.67
DER1	YBR201W	YPL109C	Q02981	657 aa		4.65	□□□□□ -1.67
DER1	YBR201W	MED7	Q08278	222 aa		4.65	□□□□□ -1.67
DER1	YBR201W	YOR059C	Q08448	450 aa	Known RBP	4.65	□□□□□ -1.67
DER1	YBR201W	LAP2	Q10740	671 aa		4.65	□□□□□ -1.67
DER1	YBR201W	NSI1	Q12457	570 aa		4.65	□□□□□ -1.67
DER1	YBR201W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.65	□□□□□ -1.67
DER1	YBR201W	PSK1	P31374	1356 aa		4.65	□□□□□ -1.67
DER1	YBR201W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-DR6	P0CX70	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-ER1	P0CX71	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-LR2	P0CX72	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-PL	P0CX73	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-JR1	P0CX74	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-LR3	P0CX75	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-ML2	P0CX76	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TAF13	P11747	167 aa		4.64	□□□□□ -1.67
DER1	YBR201W	NNK1	P36003	928 aa		4.64	□□□□□ -1.67
DER1	YBR201W	MMM1	P41800	426 aa		4.64	□□□□□ -1.67
DER1	YBR201W	YJR107W	P47145	328 aa		4.64	□□□□□ -1.67
DER1	YBR201W	ALG6	Q12001	544 aa	Known RBP	4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-GR1	Q12085	440 aa		4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.64	□□□□□ -1.67
DER1	YBR201W	TY1A-OL	Q92392	440 aa	Known RBP	4.64	□□□□□ -1.67
DER1	YBR201W	YML133C	Q03099	1374 aa		4.64	□□□□□ -1.67
DER1	YBR201W	YLL067C	Q07888	1374 aa		4.64	□□□□□ -1.67
DER1	YBR201W	YLL066C	Q99208	1374 aa		4.64	□□□□□ -1.67
DER1	YBR201W	UGA4	P32837	571 aa		4.63	□□□□□ -1.67
DER1	YBR201W	PRS1	P32895	427 aa	Known RBP	4.63	□□□□□ -1.67
DER1	YBR201W	FAA3	P39002	694 aa		4.63	□□□□□ -1.67
DER1	YBR201W	SLS1	P42900	643 aa		4.63	□□□□□ -1.67
DER1	YBR201W	CIT3	P43635	486 aa		4.63	□□□□□ -1.67
DER1	YBR201W	SPO74	P45819	413 aa		4.63	□□□□□ -1.67
DER1	YBR201W	YGR045C	P53229	120 aa		4.63	□□□□□ -1.67
DER1	YBR201W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
DER1	YBR201W	RPS24A	P0CX31	135 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	RPS24B	P0CX32	135 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	RPS4A	P0CX35	261 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	RPS4B	P0CX36	261 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	YEF3	P16521	1044 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	ATE1	P16639	503 aa		4.62	□□□□□ -1.67
DER1	YBR201W	SMY2	P32909	740 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	MAC1	P35192	417 aa		4.62	□□□□□ -1.67
DER1	YBR201W	OMA1	P36163	345 aa		4.62	□□□□□ -1.67
DER1	YBR201W	NEM1	P38757	446 aa		4.62	□□□□□ -1.67
DER1	YBR201W	YAR028W	P39548	234 aa		4.62	□□□□□ -1.67
DER1	YBR201W	RPS26A	P39938	119 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	RPS26B	P39939	119 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	MSH4	P40965	878 aa	Predicted RBP	4.62	□□□□□ -1.67
DER1	YBR201W	YGL140C	P53120	1219 aa		4.62	□□□□□ -1.67
DER1	YBR201W	YGR130C	P53278	816 aa		4.62	□□□□□ -1.67
DER1	YBR201W	PAP2	P53632	584 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	ELA1	P53861	379 aa	Predicted RBP	4.62	□□□□□ -1.67
DER1	YBR201W	ALO1	P54783	526 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	UTP5	Q04177	643 aa	Known RBP	4.62	□□□□□ -1.67
DER1	YBR201W	TOS4	Q06266	489 aa		4.62	□□□□□ -1.67
DER1	YBR201W	RRP15	Q06511	250 aa	Predicted RBP	4.62	□□□□□ -1.67
DER1	YBR201W	CYC7	P00045	113 aa		4.61	□□□□□ -1.67
DER1	YBR201W	RAD2	P07276	1031 aa		4.61	□□□□□ -1.67
DER1	YBR201W	CYC8	P14922	966 aa		4.61	□□□□□ -1.67
DER1	YBR201W	NFS1	P25374	497 aa		4.61	□□□□□ -1.67
DER1	YBR201W	ADD66	P36040	267 aa		4.61	□□□□□ -1.67
DER1	YBR201W	RMD1	Q03441	430 aa		4.61	□□□□□ -1.67
DER1	YBR201W	RKM2	Q03942	479 aa		4.61	□□□□□ -1.67
DER1	YBR201W	ESF1	Q06344	628 aa	Known RBP	4.61	□□□□□ -1.67
DER1	YBR201W	SEC23	P15303	768 aa	Known RBP	4.6	□□□□□ -1.67
DER1	YBR201W	SEC8	P32855	1065 aa		4.6	□□□□□ -1.67
DER1	YBR201W	XKS1	P42826	600 aa		4.6	□□□□□ -1.67
DER1	YBR201W	ALT1	P52893	592 aa		4.6	□□□□□ -1.67
DER1	YBR201W	HIM1	Q06674	414 aa		4.6	□□□□□ -1.67
DER1	YBR201W	YDL144C	Q07589	356 aa		4.6	□□□□□ -1.67
DER1	YBR201W	TRP3	P00937	484 aa		4.59	□□□□□ -1.67
DER1	YBR201W	PEP7	P32609	515 aa		4.59	□□□□□ -1.67
DER1	YBR201W	RDH54	P38086	958 aa		4.59	□□□□□ -1.67
DER1	YBR201W	TOS1	P38288	455 aa		4.59	□□□□□ -1.67
DER1	YBR201W	FUN12	P39730	1002 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms