RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	TRX2	P22803	104 aa	Known RBP	4.42	□□□□□ -1.7
YAL004W	YAL004W	PHO87	P25360	923 aa		4.42	□□□□□ -1.7
YAL004W	YAL004W	RNQ1	P25367	405 aa		4.42	□□□□□ -1.7
YAL004W	YAL004W	NAM7	P30771	971 aa	Known RBP	4.42	□□□□□ -1.7
YAL004W	YAL004W	TYS1	P36421	394 aa	Known RBP	4.42	□□□□□ -1.7
YAL004W	YAL004W	TED1	P40533	473 aa		4.42	□□□□□ -1.7
YAL004W	YAL004W	IES1	P43579	692 aa		4.42	□□□□□ -1.7
YAL004W	YAL004W	RPS0B	P46654	252 aa	Known RBP	4.42	□□□□□ -1.7
YAL004W	YAL004W	ENT2	Q05785	613 aa		4.42	□□□□□ -1.7
YAL004W	YAL004W	REC8	Q12188	680 aa		4.42	□□□□□ -1.7
YAL004W	YAL004W	PET112	P33893	541 aa		4.41	□□□□□ -1.7
YAL004W	YAL004W	CRP1	P38845	465 aa	Known RBP	4.41	□□□□□ -1.7
YAL004W	YAL004W	SPO74	P45819	413 aa		4.41	□□□□□ -1.7
YAL004W	YAL004W	HUL5	P53119	910 aa		4.41	□□□□□ -1.7
YAL004W	YAL004W	ESF2	P53743	316 aa	Known RBP	4.41	□□□□□ -1.7
YAL004W	YAL004W	YLR419W	Q06698	1435 aa	Known RBP	4.4	□□□□□ -1.7
YAL004W	YAL004W	CYC7	P00045	113 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	PHO8	P11491	566 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	SRM1	P21827	482 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	MRC1	P25588	1096 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	RPN12	P32496	274 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	TAF5	P38129	798 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	GIP2	P40036	548 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	DAK2	P43550	591 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	ACS2	P52910	683 aa	Known RBP	4.4	□□□□□ -1.71
YAL004W	YAL004W	ROM1	P53046	1155 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	PDS5	Q04264	1277 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	YLR125W	Q12138	136 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	VMR1	P38735	1592 aa		4.4	□□□□□ -1.71
YAL004W	YAL004W	SEC7	P11075	2009 aa	Known RBP	4.39	□□□□□ -1.71
YAL004W	YAL004W	YOR093C	Q12275	1648 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	SPE2	P21182	396 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	GRX1	P25373	110 aa	Known RBP	4.39	□□□□□ -1.71
YAL004W	YAL004W	TIM23	P32897	222 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	RPS0A	P32905	252 aa	Known RBP	4.39	□□□□□ -1.71
YAL004W	YAL004W	MNR2	P35724	969 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	BOI1	P38041	980 aa	Known RBP	4.39	□□□□□ -1.71
YAL004W	YAL004W	AKR1	P39010	764 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	QDR2	P40474	542 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	FOL1	P53848	824 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	IML1	P47170	1584 aa		4.39	□□□□□ -1.71
YAL004W	YAL004W	PHO4	P07270	312 aa	Known RBP	4.38	□□□□□ -1.71
YAL004W	YAL004W	RAD27	P26793	382 aa		4.38	□□□□□ -1.71
YAL004W	YAL004W	GCD6	P32501	712 aa	Known RBP	4.38	□□□□□ -1.71
YAL004W	YAL004W	PRS1	P32895	427 aa	Known RBP	4.38	□□□□□ -1.71
YAL004W	YAL004W	RPS26A	P39938	119 aa	Known RBP	4.38	□□□□□ -1.71
YAL004W	YAL004W	RPS26B	P39939	119 aa	Known RBP	4.38	□□□□□ -1.71
YAL004W	YAL004W	TIM54	P47045	478 aa		4.38	□□□□□ -1.71
YAL004W	YAL004W	FOX2	Q02207	900 aa	Known RBP	4.38	□□□□□ -1.71
YAL004W	YAL004W	TRS120	Q04183	1289 aa		4.38	□□□□□ -1.71
YAL004W	YAL004W	SPO20	Q04359	397 aa		4.38	□□□□□ -1.71
YAL004W	YAL004W	GAS4	Q08271	471 aa		4.38	□□□□□ -1.71
YAL004W	YAL004W	RAD4	P14736	754 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	VAN1	P23642	535 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	YCR015C	P25616	317 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	THI4	P32318	326 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	BLI1	P35727	113 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	CHZ1	P40019	153 aa	Predicted RBP	4.37	□□□□□ -1.71
YAL004W	YAL004W	SOK2	P53438	785 aa	Predicted RBP	4.37	□□□□□ -1.71
YAL004W	YAL004W	DSE4	P53753	1117 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	PPM2	Q08282	695 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	TRS33	Q99394	268 aa		4.37	□□□□□ -1.71
YAL004W	YAL004W	DNF2	Q12675	1612 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	LRG1	P35688	1017 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	PEX8	P53248	589 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	NAN1	Q02931	896 aa	Known RBP	4.36	□□□□□ -1.71
YAL004W	YAL004W	SVL3	Q03088	825 aa	Known RBP	4.36	□□□□□ -1.71
YAL004W	YAL004W	ATG16	Q03818	150 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	ERP4	Q12450	207 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	LSO1	Q3E827	93 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	BCK1	Q01389	1478 aa		4.36	□□□□□ -1.71
YAL004W	YAL004W	SEG2	P34250	1132 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	TAT2	P38967	592 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	SNF7	P39929	240 aa	Known RBP	4.35	□□□□□ -1.71
YAL004W	YAL004W	YGR122W	P53272	402 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	GDE1	Q02979	1223 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	TAF8	Q03750	510 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	TDA5	Q06417	326 aa	Known RBP	4.35	□□□□□ -1.71
YAL004W	YAL004W	GPI13	Q07830	1017 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	YOR296W	Q08748	1289 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	YOR378W	Q08902	515 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	SLX4	Q12098	748 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	NYV1	Q12255	253 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	NOP14	Q99207	810 aa	Known RBP	4.35	□□□□□ -1.71
YAL004W	YAL004W	ADR1	P07248	1323 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	CFT1	Q06632	1357 aa	Known RBP	4.35	□□□□□ -1.71
YAL004W	YAL004W	CHC1	P22137	1653 aa	Known RBP	4.35	□□□□□ -1.71
YAL004W	YAL004W	DOP1	Q03921	1698 aa		4.35	□□□□□ -1.71
YAL004W	YAL004W	RPP0	P05317	312 aa	Known RBP	4.34	□□□□□ -1.71
YAL004W	YAL004W	CYC8	P14922	966 aa		4.34	□□□□□ -1.71
YAL004W	YAL004W	DAS1	P47005	663 aa		4.34	□□□□□ -1.71
YAL004W	YAL004W	SAM37	P50110	327 aa		4.34	□□□□□ -1.71
YAL004W	YAL004W	YNR029C	P53729	429 aa	Known RBP	4.34	□□□□□ -1.71
YAL004W	YAL004W	OXR1	Q08952	273 aa		4.34	□□□□□ -1.71
YAL004W	YAL004W	RAD9	P14737	1309 aa		4.34	□□□□□ -1.71
YAL004W	YAL004W	NUP188	P52593	1655 aa	Known RBP	4.34	□□□□□ -1.71
YAL004W	YAL004W	BNI1	P41832	1953 aa		4.34	□□□□□ -1.71
YAL004W	YAL004W	PRI2	P20457	528 aa		4.33	□□□□□ -1.72
YAL004W	YAL004W	MSB1	P21339	1137 aa	Known RBP	4.33	□□□□□ -1.72
YAL004W	YAL004W	SFP1	P32432	683 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms