RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	NACC1	Q96RE7	527 aa		4.11	□□□□□ -1.75
LMBR1-222	ENST00000638959	TSHZ2	Q9NRE2	1034 aa		4.11	□□□□□ -1.75
LMBR1-222	ENST00000638959	CTBS	Q01459	385 aa		4.1	□□□□□ -1.75
LMBR1-222	ENST00000638959	TBC1D2	Q9BYX2	928 aa		4.1	□□□□□ -1.75
LMBR1-222	ENST00000638959		A0A1W2PRU2	124 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	NUTM2E	B1AL46	878 aa	Predicted RBP	4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	SPATA31C2	B4DYI2	1134 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	FAM229A	H3BQW9	127 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	CSB-PGBD3	P0DP91	1061 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	DIXDC1	Q155Q3	683 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	WDR44	Q5JSH3	913 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	PGBD3	Q8N328	593 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	HELB	Q8NG08	1087 aa	Predicted RBP	4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	PCMTD2	Q9NV79	361 aa		4.09	□□□□□ -1.75
LMBR1-222	ENST00000638959	ADH6	P28332	368 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	JAG1	P78504	1218 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	UBAP2L	Q14157	1087 aa	Known RBP	4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	TTLL12	Q14166	644 aa	Predicted RBP	4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	LBR	Q14739	615 aa	Known RBP	4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	EFHC2	Q5JST6	749 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	TRIM52	Q96A61	297 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	BEGAIN	Q9BUH8	593 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	GRIP2	Q9C0E4	1043 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	RUBCNL	Q9H714	662 aa		4.08	□□□□□ -1.76
LMBR1-222	ENST00000638959	BNIP3L	O60238	219 aa		4.07	□□□□□ -1.76
LMBR1-222	ENST00000638959	TAL1	P17542	331 aa	Predicted RBP	4.07	□□□□□ -1.76
LMBR1-222	ENST00000638959	ADAM32	Q8TC27	787 aa		4.07	□□□□□ -1.76
LMBR1-222	ENST00000638959	FKBPL	Q9UIM3	349 aa		4.07	□□□□□ -1.76
LMBR1-222	ENST00000638959	RNF112	Q9ULX5	631 aa		4.07	□□□□□ -1.76
LMBR1-222	ENST00000638959		A0A1B0GTH6	734 aa		4.06	□□□□□ -1.76
LMBR1-222	ENST00000638959	PHKA2	P46019	1235 aa		4.06	□□□□□ -1.76
LMBR1-222	ENST00000638959	GRIK4	Q16099	956 aa		4.06	□□□□□ -1.76
LMBR1-222	ENST00000638959	FCHSD1	Q86WN1	690 aa		4.06	□□□□□ -1.76
LMBR1-222	ENST00000638959	TP53INP1	Q96A56	240 aa		4.06	□□□□□ -1.76
LMBR1-222	ENST00000638959	PTK2	Q05397	1052 aa		4.05	□□□□□ -1.76
LMBR1-222	ENST00000638959	TRIM28	Q13263	835 aa	Known RBP	4.05	□□□□□ -1.76
LMBR1-222	ENST00000638959	DZIP3	Q86Y13	1208 aa	Known RBP	4.05	□□□□□ -1.76
LMBR1-222	ENST00000638959	CLN3	Q13286	438 aa		4.04	□□□□□ -1.76
LMBR1-222	ENST00000638959	QPCT	Q16769	361 aa		4.04	□□□□□ -1.76
LMBR1-222	ENST00000638959	OCSTAMP	Q9BR26	566 aa		4.04	□□□□□ -1.76
LMBR1-222	ENST00000638959	NDFIP2	Q9NV92	336 aa		4.04	□□□□□ -1.76
LMBR1-222	ENST00000638959	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	ESPN	B1AK53	854 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	C9orf172	C9J069	976 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	MBTPS1	Q14703	1052 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	LCE4A	Q5TA78	99 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	KRTAP5-3	Q6L8H2	238 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	TXNRD3	Q86VQ6	643 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	ARHGEF10L	Q9HCE6	1279 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	KLF15	Q9UIH9	416 aa		4.03	□□□□□ -1.76
LMBR1-222	ENST00000638959	SSTR4	P31391	388 aa		4.02	□□□□□ -1.77
LMBR1-222	ENST00000638959	ADGRE1	Q14246	886 aa		4.02	□□□□□ -1.77
LMBR1-222	ENST00000638959	SEPT12	Q8IYM1	358 aa		4.02	□□□□□ -1.77
LMBR1-222	ENST00000638959	AVEN	Q9NQS1	362 aa	Predicted RBP	4.02	□□□□□ -1.77
LMBR1-222	ENST00000638959	MSX1	P28360	303 aa		4.01	□□□□□ -1.77
LMBR1-222	ENST00000638959	PCBP4	P57723	403 aa	Known RBP	4.01	□□□□□ -1.77
LMBR1-222	ENST00000638959	FIGNL1	Q6PIW4	674 aa		4.01	□□□□□ -1.77
LMBR1-222	ENST00000638959	CYP2U1	Q7Z449	544 aa		4.01	□□□□□ -1.77
LMBR1-222	ENST00000638959	GPSM3	Q9Y4H4	160 aa		4.01	□□□□□ -1.77
LMBR1-222	ENST00000638959	DCDC2B	A2VCK2	349 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	LILRB3	O75022	631 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	CD33	P20138	364 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	ALAS2	P22557	587 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	GTF2E1	P29083	439 aa	Predicted RBP	4	□□□□□ -1.77
LMBR1-222	ENST00000638959	GNAS	Q5JWF2	1037 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	PPP2R2D	Q66LE6	453 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	CC2D2B	Q6DHV5	1058 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	RAB6B	Q9NRW1	208 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	LIMD1	Q9UGP4	676 aa		4	□□□□□ -1.77
LMBR1-222	ENST00000638959	OAS3	Q9Y6K5	1087 aa	Known RBP	4	□□□□□ -1.77
LMBR1-222	ENST00000638959	ELOA3C	A0A087WX78	387 aa	Predicted RBP	3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ELOA3D	A6NLF2	546 aa	Predicted RBP	3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959		M0R082	166 aa		3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	GP2	P55259	537 aa	Known RBP	3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ELOA3B	Q3SY89	546 aa		3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	RTL5	Q5HYW3	569 aa	Predicted RBP	3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ELOA3	Q8NG57	546 aa		3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ZNF417	Q8TAU3	575 aa		3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ZNF587	Q96SQ5	575 aa	Predicted RBP	3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	PRR12	Q9ULL5	1215 aa		3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	PCDHGC4	Q9Y5F7	938 aa		3.99	□□□□□ -1.77
LMBR1-222	ENST00000638959	ERVK-9	P63128	1117 aa		3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	NRG1	Q02297	640 aa	Predicted RBP	3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	NR6A1	Q15406	480 aa		3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	ZNF468	Q5VIY5	522 aa	Predicted RBP	3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	TMEM214	Q6NUQ4	689 aa	Known RBP	3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	ZCCHC2	Q9C0B9	1178 aa	Known RBP	3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	CRISPLD1	Q9H336	500 aa		3.98	□□□□□ -1.77
LMBR1-222	ENST00000638959	KHNYN	O15037	678 aa	Known RBP	3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	ATXN7	O15265	892 aa	Predicted RBP	3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	MAPT	P10636	758 aa	Known RBP	3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	SELP	P16109	830 aa		3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	CTDSPL2	Q05D32	466 aa		3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	C4orf17	Q53FE4	359 aa		3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	FAM182B	Q5T319	152 aa		3.97	□□□□□ -1.77
LMBR1-222	ENST00000638959	CCER1	Q8TC90	406 aa	Predicted RBP	3.97	□□□□□ -1.77

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