RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 HMGB2P26583 209 aaKnown RBP14.28□□□□□ -0.12
UBE3A-223ENST00000631247 MPRIPQ6WCQ1 1025 aa14.28□□□□□ -0.12
UBE3A-223ENST00000631247 CCER1Q8TC90 406 aaPredicted RBP14.28□□□□□ -0.12
UBE3A-223ENST00000631247 MAP3K5Q99683 1374 aa14.28□□□□□ -0.12
UBE3A-223ENST00000631247 ITGB4P16144 1822 aa14.27□□□□□ -0.12
UBE3A-223ENST00000631247 PALLDQ8WX93 1383 aa14.27□□□□□ -0.12
UBE3A-223ENST00000631247 EIF4G2P78344 907 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBE3A-223ENST00000631247 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
UBE3A-223ENST00000631247 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.13
UBE3A-223ENST00000631247 WASHC2AQ641Q2 1341 aa14.26□□□□□ -0.13
UBE3A-223ENST00000631247 TNNT2P45379 298 aaPredicted RBP14.26□□□□□ -0.13
UBE3A-223ENST00000631247 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
UBE3A-223ENST00000631247 TAF1LQ8IZX4 1826 aa14.25□□□□□ -0.13
UBE3A-223ENST00000631247 CYP27B1O15528 508 aa14.25□□□□□ -0.13
UBE3A-223ENST00000631247 CHD4Q14839 1912 aa14.25□□□□□ -0.13
UBE3A-223ENST00000631247 GPR162Q16538 588 aa14.24□□□□□ -0.13
UBE3A-223ENST00000631247 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
UBE3A-223ENST00000631247 SMARCC1Q92922 1105 aaPredicted RBP14.24□□□□□ -0.13
UBE3A-223ENST00000631247 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
UBE3A-223ENST00000631247 HSPA5P11021 654 aaKnown RBP14.23□□□□□ -0.13
UBE3A-223ENST00000631247 CD44P16070 742 aaKnown RBP14.23□□□□□ -0.13
UBE3A-223ENST00000631247 AK7Q96M32 723 aa14.23□□□□□ -0.13
UBE3A-223ENST00000631247 EYA1Q99502 592 aa14.23□□□□□ -0.13
UBE3A-223ENST00000631247 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
UBE3A-223ENST00000631247 C4BP0C0L5 1744 aa14.23□□□□□ -0.13
UBE3A-223ENST00000631247 GABBR2O75899 941 aa14.22□□□□□ -0.13
UBE3A-223ENST00000631247 FLAD1Q8NFF5 587 aa14.22□□□□□ -0.13
UBE3A-223ENST00000631247 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
UBE3A-223ENST00000631247 MSL1Q68DK7 614 aa14.21□□□□□ -0.13
UBE3A-223ENST00000631247 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.13
UBE3A-223ENST00000631247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■■■■□ 19.3
UBE3A-223ENST00000631247 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
UBE3A-223ENST00000631247 IFNL2Q8IZJ0 200 aa14.2□□□□□ -0.14
UBE3A-223ENST00000631247 PANK3Q9H999 370 aa14.2□□□□□ -0.14
UBE3A-223ENST00000631247 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
UBE3A-223ENST00000631247 PIGBQ92521 554 aa14.19□□□□□ -0.14
UBE3A-223ENST00000631247 PHF14O94880 888 aa14.18□□□□□ -0.14
UBE3A-223ENST00000631247 PHKG2P15735 406 aa14.18□□□□□ -0.14
UBE3A-223ENST00000631247 ZNF784Q8NCA9 323 aaPredicted RBP14.18□□□□□ -0.14
UBE3A-223ENST00000631247 UBR3Q6ZT12 1888 aa14.18□□□□□ -0.14
UBE3A-223ENST00000631247 PLEKHG2Q9H7P9 1386 aa14.18□□□□□ -0.14
UBE3A-223ENST00000631247 LOC102724428A0A0B4J2F2 783 aa14.17□□□□□ -0.14
UBE3A-223ENST00000631247 SIK1P57059 783 aa14.17□□□□□ -0.14
UBE3A-223ENST00000631247 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
UBE3A-223ENST00000631247 NLGN2Q8NFZ4 835 aa14.17□□□□□ -0.14
UBE3A-223ENST00000631247 IGSF1Q8N6C5 1336 aa14.16□□□□□ -0.14
UBE3A-223ENST00000631247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
UBE3A-223ENST00000631247 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
UBE3A-223ENST00000631247 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
UBE3A-223ENST00000631247 GNPATO15228 680 aa14.14□□□□□ -0.15
UBE3A-223ENST00000631247 ATP6V1AP38606 617 aa14.14□□□□□ -0.15
UBE3A-223ENST00000631247 PLEKHO1Q53GL0 409 aaPredicted RBP14.14□□□□□ -0.15
UBE3A-223ENST00000631247 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
UBE3A-223ENST00000631247 GRIN3BO60391 1043 aa14.13□□□□□ -0.15
UBE3A-223ENST00000631247 SSFA2P28290 1259 aa14.13□□□□□ -0.15
UBE3A-223ENST00000631247 ZNF530Q6P9A1 599 aaPredicted RBP14.13□□□□□ -0.15
UBE3A-223ENST00000631247 LINC00116Q8NCU8 138 aa14.13□□□□□ -0.15
UBE3A-223ENST00000631247 AMOTQ4VCS5 1084 aa14.12□□□□□ -0.15
UBE3A-223ENST00000631247 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
UBE3A-223ENST00000631247 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
UBE3A-223ENST00000631247 CD2APQ9Y5K6 639 aa14.12□□□□□ -0.15
UBE3A-223ENST00000631247 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
UBE3A-223ENST00000631247 ATG3Q9NT62 314 aa14.11□□□□□ -0.15
UBE3A-223ENST00000631247 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
UBE3A-223ENST00000631247 CABP4P57796 275 aa14.1□□□□□ -0.15
UBE3A-223ENST00000631247 ITPK1Q13572 414 aa14.1□□□□□ -0.15
UBE3A-223ENST00000631247 SMIM5Q71RC9 77 aa14.1□□□□□ -0.15
UBE3A-223ENST00000631247 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
UBE3A-223ENST00000631247 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
UBE3A-223ENST00000631247 KDM6AO15550 1401 aaPredicted RBP14.09□□□□□ -0.15
UBE3A-223ENST00000631247 YBX3P16989 372 aaKnown RBP eCLIP14.09□□□□□ -0.153e-6■■■□□ 14.6
UBE3A-223ENST00000631247 MTHFSP49914 203 aa14.09□□□□□ -0.15
UBE3A-223ENST00000631247 CLCN6P51797 869 aa14.09□□□□□ -0.15
UBE3A-223ENST00000631247 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
UBE3A-223ENST00000631247 AEBP1Q8IUX7 1158 aa14.09□□□□□ -0.15
UBE3A-223ENST00000631247 KDRP35968 1356 aa14.09□□□□□ -0.15
UBE3A-223ENST00000631247 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.16
UBE3A-223ENST00000631247 RTCBQ9Y3I0 505 aaKnown RBP14.08□□□□□ -0.16
UBE3A-223ENST00000631247 KIF7Q2M1P5 1343 aa14.08□□□□□ -0.16
UBE3A-223ENST00000631247 CEP350Q5VT06 3117 aa14.06□□□□□ -0.16
UBE3A-223ENST00000631247 TRAPPC3LQ5T215 181 aa14.06□□□□□ -0.16
UBE3A-223ENST00000631247 SCN11AQ9UI33 1791 aa14.06□□□□□ -0.16
UBE3A-223ENST00000631247 MMP10P09238 476 aa14.05□□□□□ -0.16
UBE3A-223ENST00000631247 IL13P35225 146 aa14.05□□□□□ -0.16
UBE3A-223ENST00000631247 WWC3Q9ULE0 1092 aa14.05□□□□□ -0.16
UBE3A-223ENST00000631247 CNTNAP4Q9C0A0 1308 aa14.05□□□□□ -0.16
UBE3A-223ENST00000631247 CICQ96RK0 1608 aaPredicted RBP14.04□□□□□ -0.16
UBE3A-223ENST00000631247 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
UBE3A-223ENST00000631247 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
UBE3A-223ENST00000631247 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
UBE3A-223ENST00000631247 RFC4P35249 363 aa14.04□□□□□ -0.16
UBE3A-223ENST00000631247 C1QTNF8P60827 252 aa14.04□□□□□ -0.16
UBE3A-223ENST00000631247 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
UBE3A-223ENST00000631247 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
UBE3A-223ENST00000631247 NLGN1Q8N2Q7 840 aa14.03□□□□□ -0.16
UBE3A-223ENST00000631247 NFATC2IPQ8NCF5 419 aa14.03□□□□□ -0.16
UBE3A-223ENST00000631247 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
UBE3A-223ENST00000631247 TJP1Q07157 1748 aa14.03□□□□□ -0.16
UBE3A-223ENST00000631247 VIRMAQ69YN4 1812 aaKnown RBP14.03□□□□□ -0.16
UBE3A-223ENST00000631247 KIF13BQ9NQT8 1826 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms