RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 GRIP2Q9C0E4 1043 aa3.57□□□□□ -1.84
SPTAN1-216ENST00000629047 RAB6BQ9NRW1 208 aa3.57□□□□□ -1.84
SPTAN1-216ENST00000629047 NOP53Q9NZM5 478 aaKnown RBP3.57□□□□□ -1.84
SPTAN1-216ENST00000629047 SPATA31C2B4DYI2 1134 aa3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 WASLO00401 505 aaPredicted RBP3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 BNIP3LO60238 219 aa3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 FGFR3P22607 806 aa3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 GPC1P35052 558 aa3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 FCHSD1Q86WN1 690 aa3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 HELBQ8NG08 1087 aaPredicted RBP3.56□□□□□ -1.84
SPTAN1-216ENST00000629047 SCTRP47872 440 aa3.55□□□□□ -1.84
SPTAN1-216ENST00000629047 ARHGEF10LQ9HCE6 1279 aa3.55□□□□□ -1.84
SPTAN1-216ENST00000629047 NDFIP2Q9NV92 336 aa3.55□□□□□ -1.84
SPTAN1-216ENST00000629047 SPATA31C1P0DKV0 1188 aa3.54□□□□□ -1.84
SPTAN1-216ENST00000629047 NBPF20Q3BBV1 942 aa3.54□□□□□ -1.84
SPTAN1-216ENST00000629047 TAS1R3Q7RTX0 852 aa3.54□□□□□ -1.84
SPTAN1-216ENST00000629047 RTN4Q9NQC3 1192 aaKnown RBP3.54□□□□□ -1.84
SPTAN1-216ENST00000629047 GIGYF1O75420 1035 aaPredicted RBP3.53□□□□□ -1.84
SPTAN1-216ENST00000629047 DZIP3Q86Y13 1208 aaKnown RBP3.53□□□□□ -1.84
SPTAN1-216ENST00000629047 NLRP3Q96P20 1036 aa3.53□□□□□ -1.84
SPTAN1-216ENST00000629047 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
SPTAN1-216ENST00000629047 IL2RAP01589 272 aa3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 ARAFP10398 606 aa3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 MSX1P28360 303 aa3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 PTK2Q05397 1052 aa3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 CLN3Q13286 438 aa3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 ATXN7L1Q9ULK2 861 aaPredicted RBP3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 PHF24Q9UPV7 400 aa3.52□□□□□ -1.85
SPTAN1-216ENST00000629047 STAU1O95793 577 aaKnown RBP3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 CD33P20138 364 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 PCBP4P57723 403 aaKnown RBP3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 ERVK-9P63128 1117 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 COL9A3Q14050 684 aaPredicted RBP3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 DIXDC1Q155Q3 683 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 GRIK4Q16099 956 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 C4orf17Q53FE4 359 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 C8orf86Q6ZUL3 223 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 OSBPL3Q9H4L5 887 aa3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 HMX1Q9NP08 348 aaPredicted RBP3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 DNAAF2Q9NVR5 837 aaKnown RBP3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 ARID1BQ8NFD5 2236 aaPredicted RBP3.51□□□□□ -1.85
SPTAN1-216ENST00000629047 DCDC2BA2VCK2 349 aa3.5□□□□□ -1.85
SPTAN1-216ENST00000629047 PIK3R2O00459 728 aa3.5□□□□□ -1.85
SPTAN1-216ENST00000629047 POLR3EQ9NVU0 708 aa3.5□□□□□ -1.85
SPTAN1-216ENST00000629047 ZC3H4Q9UPT8 1303 aaKnown RBP3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 A0A1B0GTH6 734 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 CLK2P49760 499 aaKnown RBP3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 CENPCQ03188 943 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 TUSC1Q2TAM9 212 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 WDR44Q5JSH3 913 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 CC2D2BQ6DHV5 1058 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 TRIM52Q96A61 297 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
SPTAN1-216ENST00000629047 TTBK1Q5TCY1 1321 aaPredicted RBP3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 APBA3O96018 575 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 YBX3P16989 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 ADH6P28332 368 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 FZD5Q13467 585 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 PPP2R2DQ66LE6 453 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 BARGINQ6ZT62 677 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 FMNL2Q96PY5 1086 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 ZCCHC2Q9C0B9 1178 aaKnown RBP3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 FHDC1Q9C0D6 1143 aaPredicted RBP3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 STRN4Q9NRL3 753 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 HRH3Q9Y5N1 445 aa3.48□□□□□ -1.85
SPTAN1-216ENST00000629047 COL17A1Q9UMD9 1497 aaPredicted RBP3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 TRAK2O60296 914 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 CSB-PGBD3P0DP91 1061 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 SELPP16109 830 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 LAMC2Q13753 1193 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 MBTPS1Q14703 1052 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 EFHC2Q5JST6 749 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 CYP2U1Q7Z449 544 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 PGBD3Q8N328 593 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 CNKSR1Q969H4 720 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 GPSM3Q9Y4H4 160 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 PCDHB9Q9Y5E1 797 aa3.47□□□□□ -1.85
SPTAN1-216ENST00000629047 TRIM66O15016 1216 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 PAX4O43316 350 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 H2AFB1P0C5Y9 115 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 H2AFB2P0C5Z0 115 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 MAPTP10636 758 aaKnown RBP3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 ATP4AP20648 1035 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 PLA2G4AP47712 749 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 NRG1Q02297 640 aaPredicted RBP3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 PRRT3Q5FWE3 981 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 SHISA2Q6UWI4 295 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 SEPT12Q8IYM1 358 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 TP53INP1Q96A56 240 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 ZSCAN10Q96SZ4 725 aaPredicted RBP3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 MDFIQ99750 246 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 STARD13Q9Y3M8 1113 aa3.46□□□□□ -1.86
SPTAN1-216ENST00000629047 KHNYNO15037 678 aaKnown RBP3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 ZMYND10O75800 440 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 ALBP02768 609 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 TXKP42681 527 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 ADGRE1Q14246 886 aa3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 LBRQ14739 615 aaKnown RBP3.45□□□□□ -1.86
SPTAN1-216ENST00000629047 ESYT1Q9BSJ8 1104 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms