RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 SEMA3FQ13275 785 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 LCE2CQ5TA81 110 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 SRA1Q9HD15 236 aaKnown RBP2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 DNAAF2Q9NVR5 837 aaKnown RBP2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 EGFL7Q9UHF1 273 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 SENP3-EIF4A1A0A087X0R7 540 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 TTLL8A6PVC2 850 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 EPS8L1Q8TE68 723 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 DCAF11Q8TEB1 546 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 CLP1Q92989 425 aaKnown RBP2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 GMPR2Q9P2T1 348 aaKnown RBP2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 USTQ9Y2C2 406 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 ZNF784Q8NCA9 323 aaPredicted RBP2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 DOLKQ9UPQ8 538 aa2.89□□□□□ -1.95
AP000648.3-201ENST00000623539 PATL2C9JE40 543 aaKnown RBP2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 RAD21O60216 631 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 WEE1P30291 646 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 NSFL1CQ9UNZ2 370 aaKnown RBP2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 TMEM229AB2RXF0 380 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 CENPCQ03188 943 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 TAS1R3Q7RTX0 852 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 ITPKCQ96DU7 683 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 SCHIP1Q9P0W5 487 aaPredicted RBP2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 ATXN7L1Q9ULK2 861 aaPredicted RBP2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 PHF24Q9UPV7 400 aa2.88□□□□□ -1.95
AP000648.3-201ENST00000623539 FOXC1Q12948 553 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 SLFNL1Q499Z3 407 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 SCARA3Q6AZY7 606 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 ZNF775Q96BV0 537 aaPredicted RBP2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 TLL2Q9Y6L7 1015 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 A0A1W2PRU2 124 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 ITGA6P23229 1130 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 CCDC155Q8N6L0 562 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 RPLP1P05386 114 aaKnown RBP2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 TNFRSF25Q93038 417 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 FSHRP23945 695 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 COL19A1Q14993 1142 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 ZFP42Q96MM3 310 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 FRRS1LQ9P0K9 344 aa2.87□□□□□ -1.95
AP000648.3-201ENST00000623539 SYNGAP1Q96PV0 1343 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 SNRPBP14678 240 aaKnown RBP2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 LINC01559Q495D7 138 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 CFAP70Q5T0N1 1121 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 PTCD1O75127 700 aaKnown RBP2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 PTK7Q13308 1070 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 TBC1D2BQ9UPU7 963 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 RNF225M0QZC1 329 aaPredicted RBP2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 GSK3AP49840 483 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 PCSK7Q16549 785 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 DMGDHQ9UI17 866 aaKnown RBP2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 DNMT3LQ9UJW3 386 aa2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 MAFBQ9Y5Q3 323 aaPredicted RBP2.86□□□□□ -1.95
AP000648.3-201ENST00000623539 FOXR1Q6PIV2 292 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 PCDHB9Q9Y5E1 797 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 A6NJY4 79 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 SIN3BO75182 1162 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 SLCO4C1Q6ZQN7 724 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 ADAMTS19Q8TE59 1207 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 UCN2Q96RP3 112 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 PPP1R12CQ9BZL4 782 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 ZNF358Q9NW07 568 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 GDF2Q9UK05 429 aaPredicted RBP2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 TNFRSF10AO00220 468 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 GNASQ5JWF2 1037 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 CITED4Q96RK1 184 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 ACIN1Q9UKV3 1341 aaKnown RBP2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 C11orf95C9JLR9 678 aaPredicted RBP2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 UBTFP17480 764 aaKnown RBP2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 DTWD1Q8N5C7 304 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 NLRP3Q96P20 1036 aa2.85□□□□□ -1.95
AP000648.3-201ENST00000623539 RELBQ01201 579 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 FAM69CQ0P6D2 419 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 ZIC5Q96T25 663 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 C2orf49Q9BVC5 232 aaPredicted RBP2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 ZFAND3Q9H8U3 227 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 ETNK1Q9HBU6 452 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 DACH1Q9UI36 760 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 MSX1P28360 303 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 GDF10P55107 478 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 PCDHGC4Q9Y5F7 938 aa2.84□□□□□ -1.95
AP000648.3-201ENST00000623539 THBS1P07996 1170 aa2.84□□□□□ -1.96
AP000648.3-201ENST00000623539 PTSQ03393 145 aa2.84□□□□□ -1.96
AP000648.3-201ENST00000623539 FAM13BQ9NYF5 915 aa2.84□□□□□ -1.96
AP000648.3-201ENST00000623539 GNEQ9Y223 722 aaKnown RBP2.84□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L5A8MUK1 530 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 RTN1Q16799 776 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 NIFKQ9BYG3 293 aaKnown RBP2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 PCDHB11Q9Y5F2 797 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 BCRP11274 1271 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 HOXB4P17483 251 aaPredicted RBP2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 PSMA6P60900 246 aaKnown RBP2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 TNP2Q05952 138 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 ZNF385CQ66K41 422 aaPredicted RBP2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 GOLGA6L1Q8N7Z2 621 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 VRTNQ9H8Y1 702 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 ENAMQ9NRM1 1142 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 ST8SIA5O15466 376 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 GTF2E1P29083 439 aaPredicted RBP2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 SOX18P35713 384 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms