RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 C1orf229Q6ZS94 237 aaPredicted RBP9.22□□□□□ -0.93
ZNF540-204ENST00000586792 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
ZNF540-204ENST00000586792 C1QTNF9BB2RNN3 333 aa9.21□□□□□ -0.94
ZNF540-204ENST00000586792 LINC00114Q6XXX2 140 aa9.21□□□□□ -0.94
ZNF540-204ENST00000586792 NOP53Q9NZM5 478 aaKnown RBP9.21□□□□□ -0.94
ZNF540-204ENST00000586792 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
ZNF540-204ENST00000586792 CSB-PGBD3P0DP91 1061 aa9.2□□□□□ -0.94
ZNF540-204ENST00000586792 PGBD3Q8N328 593 aa9.2□□□□□ -0.94
ZNF540-204ENST00000586792 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
ZNF540-204ENST00000586792 BMP4P12644 408 aa9.19□□□□□ -0.94
ZNF540-204ENST00000586792 GTF2E1P29083 439 aaPredicted RBP9.19□□□□□ -0.94
ZNF540-204ENST00000586792 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
ZNF540-204ENST00000586792 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
ZNF540-204ENST00000586792 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
ZNF540-204ENST00000586792 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
ZNF540-204ENST00000586792 SLCO4C1Q6ZQN7 724 aa9.18□□□□□ -0.94
ZNF540-204ENST00000586792 CD163Q86VB7 1156 aa9.18□□□□□ -0.94
ZNF540-204ENST00000586792 SUV39H2Q9H5I1 410 aa9.18□□□□□ -0.94
ZNF540-204ENST00000586792 GPAMQ9HCL2 828 aa9.18□□□□□ -0.94
ZNF540-204ENST00000586792 GNRH1P01148 92 aa9.17□□□□□ -0.94
ZNF540-204ENST00000586792 TRAK2O60296 914 aa9.16□□□□□ -0.94
ZNF540-204ENST00000586792 THBS1P07996 1170 aa9.16□□□□□ -0.94
ZNF540-204ENST00000586792 EFHC2Q5JST6 749 aa9.16□□□□□ -0.94
ZNF540-204ENST00000586792 ESYT1Q9BSJ8 1104 aa9.16□□□□□ -0.94
ZNF540-204ENST00000586792 GGA1Q9UJY5 639 aa9.16□□□□□ -0.94
ZNF540-204ENST00000586792 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
ZNF540-204ENST00000586792 CENPCQ03188 943 aa9.15□□□□□ -0.94
ZNF540-204ENST00000586792 CNKSR1Q969H4 720 aa9.15□□□□□ -0.94
ZNF540-204ENST00000586792 BTBD6Q96KE9 485 aa9.15□□□□□ -0.94
ZNF540-204ENST00000586792 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
ZNF540-204ENST00000586792 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
ZNF540-204ENST00000586792 EPXP11678 715 aa9.14□□□□□ -0.95
ZNF540-204ENST00000586792 PHKA2P46019 1235 aa9.14□□□□□ -0.95
ZNF540-204ENST00000586792 SCTRP47872 440 aa9.14□□□□□ -0.95
ZNF540-204ENST00000586792 GNASQ5JWF2 1037 aa9.14□□□□□ -0.95
ZNF540-204ENST00000586792 SEMA6BQ9H3T3 888 aa9.14□□□□□ -0.95
ZNF540-204ENST00000586792 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-204ENST00000586792 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
ZNF540-204ENST00000586792 ZCCHC6Q5VYS8 1495 aaKnown RBP9.14□□□□□ -0.95
ZNF540-204ENST00000586792 KRTAP9-6A0A140TA67 174 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 FGFR3P22607 806 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 RFC5P40937 340 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
ZNF540-204ENST00000586792 ZMYM1Q5SVZ6 1142 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 TRIM34Q9BYJ4 488 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 MYO15BQ96JP2 1530 aa9.13□□□□□ -0.95
ZNF540-204ENST00000586792 ARAFP10398 606 aa9.12□□□□□ -0.95
ZNF540-204ENST00000586792 CHRNA4P43681 627 aa9.12□□□□□ -0.95
ZNF540-204ENST00000586792 C2CD2LO14523 706 aa9.11□□□□□ -0.95
ZNF540-204ENST00000586792 DGKGP49619 791 aa9.11□□□□□ -0.95
ZNF540-204ENST00000586792 TMEM214Q6NUQ4 689 aaKnown RBP9.11□□□□□ -0.95
ZNF540-204ENST00000586792 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
ZNF540-204ENST00000586792 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
ZNF540-204ENST00000586792 DOC2BQ14184 412 aa9.1□□□□□ -0.95
ZNF540-204ENST00000586792 TMEM259Q4ZIN3 620 aa9.1□□□□□ -0.95
ZNF540-204ENST00000586792 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
ZNF540-204ENST00000586792 RNF135Q8IUD6 432 aa9.1□□□□□ -0.95
ZNF540-204ENST00000586792 ABHD17AQ96GS6 310 aa9.1□□□□□ -0.95
ZNF540-204ENST00000586792 BNIP3LO60238 219 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 MYCP01106 439 aaPredicted RBP9.09□□□□□ -0.95
ZNF540-204ENST00000586792 IL2RAP01589 272 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 MSX1P28360 303 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 GATA4P43694 442 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 CTBSQ01459 385 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 XAGE2Q96GT9 111 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 NDFIP2Q9NV92 336 aa9.09□□□□□ -0.95
ZNF540-204ENST00000586792 ITGB7P26010 798 aa9.08□□□□□ -0.96
ZNF540-204ENST00000586792 ESCO1Q5FWF5 840 aa9.08□□□□□ -0.96
ZNF540-204ENST00000586792 FAM117AQ9C073 453 aa9.08□□□□□ -0.96
ZNF540-204ENST00000586792 DCAF1Q9Y4B6 1507 aa9.08□□□□□ -0.96
ZNF540-204ENST00000586792 NEURL1BA8MQ27 555 aa9.07□□□□□ -0.96
ZNF540-204ENST00000586792 NR1H3Q13133 447 aa9.07□□□□□ -0.96
ZNF540-204ENST00000586792 C4orf17Q53FE4 359 aa9.07□□□□□ -0.96
ZNF540-204ENST00000586792 CRISPLD1Q9H336 500 aa9.07□□□□□ -0.96
ZNF540-204ENST00000586792 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
ZNF540-204ENST00000586792 HRH3Q9Y5N1 445 aa9.07□□□□□ -0.96
ZNF540-204ENST00000586792 CHSY3Q70JA7 882 aa9.06□□□□□ -0.96
ZNF540-204ENST00000586792 RHBDD1Q8TEB9 315 aa9.05□□□□□ -0.96
ZNF540-204ENST00000586792 FHDC1Q9C0D6 1143 aaPredicted RBP9.05□□□□□ -0.96
ZNF540-204ENST00000586792 SCO2A0A1W2PP80 73 aa9.04□□□□□ -0.96
ZNF540-204ENST00000586792 SPATA31C1P0DKV0 1188 aa9.04□□□□□ -0.96
ZNF540-204ENST00000586792 ADH6P28332 368 aa9.04□□□□□ -0.96
ZNF540-204ENST00000586792 KRTAP1-3Q8IUG1 177 aa9.04□□□□□ -0.96
ZNF540-204ENST00000586792 AVENQ9NQS1 362 aaPredicted RBP9.04□□□□□ -0.96
ZNF540-204ENST00000586792 PCDHGC4Q9Y5F7 938 aa9.04□□□□□ -0.96
ZNF540-204ENST00000586792 UNC13AQ9UPW8 1703 aa9.03□□□□□ -0.96
ZNF540-204ENST00000586792 NLRP8Q86W28 1048 aa9.02□□□□□ -0.97
ZNF540-204ENST00000586792 PPARGC1BQ86YN6 1023 aaKnown RBP9.02□□□□□ -0.97
ZNF540-204ENST00000586792 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
ZNF540-204ENST00000586792 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
ZNF540-204ENST00000586792 SPDYE3A6NKU9 549 aa9.01□□□□□ -0.97
ZNF540-204ENST00000586792 FAM182BQ5T319 152 aa9.01□□□□□ -0.97
ZNF540-204ENST00000586792 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
ZNF540-204ENST00000586792 ZCCHC2Q9C0B9 1178 aaKnown RBP9.01□□□□□ -0.97
ZNF540-204ENST00000586792 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-204ENST00000586792 PLVAPQ9BX97 442 aa9□□□□□ -0.97
ZNF540-204ENST00000586792 ATXN7O15265 892 aaPredicted RBP8.99□□□□□ -0.97
ZNF540-204ENST00000586792 GOPCQ9HD26 462 aa8.99□□□□□ -0.97
ZNF540-204ENST00000586792 RSPO4Q2I0M5 234 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms