RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 XBP1P17861 261 aa14.56□□□□□ -0.08
CSPG4P13-202ENST00000567704 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
CSPG4P13-202ENST00000567704 UGGT2Q9NYU1 1516 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 DACH1Q9UI36 760 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 V9GYY5 206 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 IBSPP21815 317 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 LMAN1P49257 510 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 TMX1Q9H3N1 280 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 SUPT6HQ7KZ85 1726 aaKnown RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 SNW1Q13573 536 aaKnown RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 JAKMIP3Q5VZ66 844 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 CRACR2AQ9BSW2 395 aa14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 DDX19AQ9NUU7 478 aaKnown RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 MAGEC2Q9UBF1 373 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
CSPG4P13-202ENST00000567704 CCDC181Q5TID7 509 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 GPATCH11Q8N954 259 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 SH2B1Q9NRF2 756 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 GOLGA6L10A6NI86 522 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 EPB41L2O43491 1005 aaKnown RBP14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 RAB11FIP3O75154 756 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 TTC22Q5TAA0 569 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 USP48Q86UV5 1035 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 GBP3Q9H0R5 595 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 PIP4K2AP48426 406 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 NOL7Q9UMY1 257 aaKnown RBP14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 ARHGAP5Q13017 1502 aa14.54□□□□□ -0.08
CSPG4P13-202ENST00000567704 GJB2P29033 226 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 CASQ1P31415 396 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 KIF4BQ2VIQ3 1234 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 RLBP1P12271 317 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 RBSNQ9H1K0 784 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 KRT32Q14532 448 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 TSHZ3Q63HK5 1081 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 TOP1P11387 765 aaKnown RBP14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 NLRP6P59044 892 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 TMC6Q7Z403 805 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 IPO4Q8TEX9 1081 aaKnown RBP14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 CNPY2Q9Y2B0 182 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
CSPG4P13-202ENST00000567704 PCF11O94913 1555 aaKnown RBP14.52□□□□□ -0.08
CSPG4P13-202ENST00000567704 CDK13Q14004 1512 aaKnown RBP14.52□□□□□ -0.09
CSPG4P13-202ENST00000567704 RRS1Q15050 365 aaKnown RBP14.52□□□□□ -0.09
CSPG4P13-202ENST00000567704 GIMAP7Q8NHV1 300 aa14.52□□□□□ -0.09
CSPG4P13-202ENST00000567704 CDK19Q9BWU1 502 aa14.52□□□□□ -0.09
CSPG4P13-202ENST00000567704 F6X3S4 739 aa14.52□□□□□ -0.09
CSPG4P13-202ENST00000567704 GSDMDP57764 484 aa14.52□□□□□ -0.09
CSPG4P13-202ENST00000567704 SDSP20132 328 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 SART3Q15020 963 aaKnown RBP14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 ABCC11Q96J66 1382 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 GLRX3O76003 335 aaKnown RBP14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 ZGPATQ8N5A5 531 aaKnown RBP14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 EPS15P42566 896 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 KIF1BPQ96EK5 621 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 PTPN23Q9H3S7 1636 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
CSPG4P13-202ENST00000567704 CTAGE5O15320 804 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 SKILP12757 684 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 ODF2Q5BJF6 829 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 ZSWIM4Q9H7M6 989 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 BIN1O00499 593 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 FYB1O15117 783 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 KIF5CO60282 957 aa14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 ZSCAN22P10073 491 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P13-202ENST00000567704 MCM10Q7L590 875 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 FAM200AQ8TCP9 573 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 KDM2BQ8NHM5 1336 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 RAD21O60216 631 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 TXLNAP40222 546 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 FSIP1Q8NA03 581 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 KIAA0556O60303 1618 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 ABCC5O15440 1437 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 CCDC171Q6TFL3 1326 aa14.49□□□□□ -0.09
CSPG4P13-202ENST00000567704 RBM25P49756 843 aaKnown RBP14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 ANO6Q4KMQ2 910 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 STX1AQ16623 288 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 MYO6Q9UM54 1294 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 CT47A1Q5JQC4 288 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 VPS37DQ86XT2 251 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 TRIM22Q8IYM9 498 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 CCDC148Q8NFR7 591 aa14.48□□□□□ -0.09
CSPG4P13-202ENST00000567704 PTGS1P23219 599 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 IQCEQ6IPM2 695 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 KIAA1328Q86T90 577 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 TXLNBQ8N3L3 684 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 OGFRQ9NZT2 677 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 GNG11P61952 73 aa14.47□□□□□ -0.09
CSPG4P13-202ENST00000567704 CPLX3Q8WVH0 158 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms