RNA–Protein interactions for RNA: ENST00000563779.5

CMC2-206, Transcript of C-X9-C motif containing 2, humanhuman

TSL 1 (best)

Gene CMC2, Length 2,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-206ENST00000563779 PSMD2Q13200 908 aa8.85□□□□□ -0.99
CMC2-206ENST00000563779 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
CMC2-206ENST00000563779 DSC3Q14574 896 aa8.85□□□□□ -0.99
CMC2-206ENST00000563779 SWT1Q5T5J6 900 aaKnown RBP8.85□□□□□ -0.99
CMC2-206ENST00000563779 CCDC85AQ96PX6 553 aaPredicted RBP8.85□□□□□ -0.99
CMC2-206ENST00000563779 PCDH12Q9NPG4 1184 aa8.85□□□□□ -0.99
CMC2-206ENST00000563779 CCDC194A0A1B0GVG4 234 aa8.85□□□□□ -0.99
CMC2-206ENST00000563779 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
CMC2-206ENST00000563779 ARID5AQ03989 594 aa8.85□□□□□ -0.99
CMC2-206ENST00000563779 METTL5Q9NRN9 209 aaKnown RBP8.85□□□□□ -0.99
CMC2-206ENST00000563779 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
CMC2-206ENST00000563779 ARMC5Q96C12 935 aa8.84□□□□□ -0.99
CMC2-206ENST00000563779 ABCC9O60706 1549 aa8.84□□□□□ -0.99
CMC2-206ENST00000563779 PLEKHG6Q3KR16 790 aa8.84□□□□□ -0.99
CMC2-206ENST00000563779 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
CMC2-206ENST00000563779 LYPD8Q6UX82 237 aa8.84□□□□□ -0.99
CMC2-206ENST00000563779 ZNF687Q8N1G0 1237 aa8.84□□□□□ -0.99
CMC2-206ENST00000563779 PMM1Q92871 262 aa8.84□□□□□ -0.99
CMC2-206ENST00000563779 CTSHP09668 335 aa8.83□□□□□ -1
CMC2-206ENST00000563779 FGRP09769 529 aa8.83□□□□□ -1
CMC2-206ENST00000563779 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
CMC2-206ENST00000563779 HELQQ8TDG4 1101 aa8.83□□□□□ -1
CMC2-206ENST00000563779 NOD1Q9Y239 953 aa8.83□□□□□ -1
CMC2-206ENST00000563779 TRIM6-TRIM34B2RNG4 842 aa8.82□□□□□ -1
CMC2-206ENST00000563779 IBSPP21815 317 aaPredicted RBP8.82□□□□□ -1
CMC2-206ENST00000563779 ATP1A2P50993 1020 aa8.82□□□□□ -1
CMC2-206ENST00000563779 RETREG3Q86VR2 466 aa8.82□□□□□ -1
CMC2-206ENST00000563779 WEE1P30291 646 aa8.82□□□□□ -1
CMC2-206ENST00000563779 CBLBQ13191 982 aa8.82□□□□□ -1
CMC2-206ENST00000563779 GNL2Q13823 731 aaKnown RBP8.82□□□□□ -1
CMC2-206ENST00000563779 SAP130Q9H0E3 1048 aa8.82□□□□□ -1
CMC2-206ENST00000563779 IRF2BPLQ9H1B7 796 aa8.82□□□□□ -1
CMC2-206ENST00000563779 DDX41Q9UJV9 622 aaKnown RBP8.82□□□□□ -1
CMC2-206ENST00000563779 PRR12Q9ULL5 1215 aa8.82□□□□□ -1
CMC2-206ENST00000563779 F12P00748 615 aaPredicted RBP8.81□□□□□ -1
CMC2-206ENST00000563779 TRIM50Q86XT4 487 aa8.81□□□□□ -1
CMC2-206ENST00000563779 HSD3B2P26439 372 aa8.81□□□□□ -1
CMC2-206ENST00000563779 POTEB3A0JP26 581 aa8.8□□□□□ -1
CMC2-206ENST00000563779 PBX2P40425 430 aa8.8□□□□□ -1
CMC2-206ENST00000563779 NEUROD1Q13562 356 aa8.8□□□□□ -1
CMC2-206ENST00000563779 POTEBQ6S5H4 581 aa8.8□□□□□ -1
CMC2-206ENST00000563779 RNF19BQ6ZMZ0 732 aa8.8□□□□□ -1
CMC2-206ENST00000563779 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
CMC2-206ENST00000563779 APBB1IPQ7Z5R6 666 aaPredicted RBP8.79□□□□□ -1
CMC2-206ENST00000563779 KANSL2Q9H9L4 492 aa8.79□□□□□ -1
CMC2-206ENST00000563779 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
CMC2-206ENST00000563779 PCDHGA11Q9Y5H2 935 aa8.79□□□□□ -1
CMC2-206ENST00000563779 STK10O94804 968 aaKnown RBP8.79□□□□□ -1
CMC2-206ENST00000563779 CFHP08603 1231 aa8.79□□□□□ -1
CMC2-206ENST00000563779 DIEXFQ68CQ4 756 aaKnown RBP8.79□□□□□ -1
CMC2-206ENST00000563779 K7ELQ4 463 aaPredicted RBP8.78□□□□□ -1
CMC2-206ENST00000563779 U2SURPO15042 1029 aaKnown RBP8.78□□□□□ -1
CMC2-206ENST00000563779 NDUFB5O43674 189 aa8.78□□□□□ -1
CMC2-206ENST00000563779 FZD6O60353 706 aa8.78□□□□□ -1
CMC2-206ENST00000563779 RNF187Q5TA31 235 aaPredicted RBP8.78□□□□□ -1
CMC2-206ENST00000563779 CCDC181Q5TID7 509 aa8.78□□□□□ -1
CMC2-206ENST00000563779 MAP7D1Q3KQU3 841 aa8.77□□□□□ -1
CMC2-206ENST00000563779 USP48Q86UV5 1035 aa8.77□□□□□ -1
CMC2-206ENST00000563779 MORC4Q8TE76 937 aa8.77□□□□□ -1
CMC2-206ENST00000563779 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.77□□□□□ -1
CMC2-206ENST00000563779 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1
CMC2-206ENST00000563779 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1
CMC2-206ENST00000563779 A0A0U1RQG5 324 aaPredicted RBP8.77□□□□□ -1.01
CMC2-206ENST00000563779 PLCB3Q01970 1234 aa8.77□□□□□ -1.01
CMC2-206ENST00000563779 ADAM32Q8TC27 787 aa8.77□□□□□ -1.01
CMC2-206ENST00000563779 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
CMC2-206ENST00000563779 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
CMC2-206ENST00000563779 AMPD3Q01432 767 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 BLOC1S3Q6QNY0 202 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 CFHR5Q9BXR6 569 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 DDX56Q9NY93 547 aaKnown RBP8.76□□□□□ -1.01
CMC2-206ENST00000563779 PNMA6FA0A0J9YX94 578 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 NPR3P17342 541 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 ATP6V1AP38606 617 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 EIF1AXP47813 144 aaKnown RBP8.76□□□□□ -1.01
CMC2-206ENST00000563779 SPNS2Q8IVW8 549 aa8.76□□□□□ -1.01
CMC2-206ENST00000563779 RNPC3Q96LT9 517 aaKnown RBP8.76□□□□□ -1.01
CMC2-206ENST00000563779 SEPT9Q9UHD8 586 aaPredicted RBP8.76□□□□□ -1.01
CMC2-206ENST00000563779 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 ATCAYQ86WG3 371 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 FMNL3Q8IVF7 1028 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 CCDC146Q8IYE0 955 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 NKX2-3Q8TAU0 364 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 NIF3L1Q9GZT8 377 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 RB1CC1Q8TDY2 1594 aa8.75□□□□□ -1.01
CMC2-206ENST00000563779 FAM13AO94988 1023 aa8.74□□□□□ -1.01
CMC2-206ENST00000563779 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
CMC2-206ENST00000563779 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
CMC2-206ENST00000563779 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
CMC2-206ENST00000563779 XRCC5P13010 732 aaKnown RBP8.74□□□□□ -1.01
CMC2-206ENST00000563779 ATF4P18848 351 aaPredicted RBP8.74□□□□□ -1.01
CMC2-206ENST00000563779 CTHP32929 405 aa8.74□□□□□ -1.01
CMC2-206ENST00000563779 AAMPQ13685 434 aa8.74□□□□□ -1.01
CMC2-206ENST00000563779 HSP90AB2PQ58FF8 381 aa8.74□□□□□ -1.01
CMC2-206ENST00000563779 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
CMC2-206ENST00000563779 SPOCK3Q9BQ16 436 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms