RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 PLPP7Q8NBV4 271 aa6.3□□□□□ -1.4
LINC01416-201ENST00000563553 ZSCAN10Q96SZ4 725 aaPredicted RBP6.3□□□□□ -1.4
LINC01416-201ENST00000563553 GPAMQ9HCL2 828 aa6.3□□□□□ -1.4
LINC01416-201ENST00000563553 HCN2Q9UL51 889 aa6.3□□□□□ -1.4
LINC01416-201ENST00000563553 USP4Q13107 963 aa6.29□□□□□ -1.4
LINC01416-201ENST00000563553 ACDQ96AP0 544 aa6.29□□□□□ -1.4
LINC01416-201ENST00000563553 ALG2Q9H553 416 aa6.29□□□□□ -1.4
LINC01416-201ENST00000563553 TMEM229AB2RXF0 380 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 RASSF7Q02833 373 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 PPARGC1BQ86YN6 1023 aaKnown RBP6.28□□□□□ -1.4
LINC01416-201ENST00000563553 ADAMTS19Q8TE59 1207 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 NUCKS1Q9H1E3 243 aaKnown RBP6.28□□□□□ -1.4
LINC01416-201ENST00000563553 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 H7C1W4 665 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 WASHC4Q2M389 1173 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 PRM3Q9NNZ6 103 aa6.28□□□□□ -1.4
LINC01416-201ENST00000563553 A0A1B0GTH6 734 aa6.27□□□□□ -1.41
LINC01416-201ENST00000563553 INHAP05111 366 aa6.27□□□□□ -1.41
LINC01416-201ENST00000563553 PCDHGA11Q9Y5H2 935 aa6.27□□□□□ -1.41
LINC01416-201ENST00000563553 ATP4AP20648 1035 aa6.27□□□□□ -1.41
LINC01416-201ENST00000563553 GDF10P55107 478 aa6.27□□□□□ -1.41
LINC01416-201ENST00000563553 NDFIP2Q9NV92 336 aa6.27□□□□□ -1.41
LINC01416-201ENST00000563553 DNAAF2Q9NVR5 837 aaKnown RBP6.27□□□□□ -1.41
LINC01416-201ENST00000563553 IQSEC3Q9UPP2 1182 aaPredicted RBP6.27□□□□□ -1.41
LINC01416-201ENST00000563553 TLR1Q15399 786 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 KCTD17Q8N5Z5 321 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 RHBDD1Q8TEB9 315 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 RUBCNLQ9H714 662 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 MSX1P28360 303 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 MAP7D1Q3KQU3 841 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 ESCO1Q5FWF5 840 aa6.26□□□□□ -1.41
LINC01416-201ENST00000563553 C1orf229Q6ZS94 237 aaPredicted RBP6.26□□□□□ -1.41
LINC01416-201ENST00000563553 ESF1Q9H501 851 aaKnown RBP6.26□□□□□ -1.41
LINC01416-201ENST00000563553 POM121CA8CG34 1229 aa6.25□□□□□ -1.41
LINC01416-201ENST00000563553 SOX11P35716 441 aa6.25□□□□□ -1.41
LINC01416-201ENST00000563553 TMEM214Q6NUQ4 689 aaKnown RBP6.25□□□□□ -1.41
LINC01416-201ENST00000563553 GDF11O95390 407 aa6.25□□□□□ -1.41
LINC01416-201ENST00000563553 C2CD2LO14523 706 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 MX2P20592 715 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 IRS1P35568 1242 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 SEMA3FQ13275 785 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 MTFR1Q15390 333 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 SLC4A9Q96Q91 983 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 CRISPLD1Q9H336 500 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 NISCHQ9Y2I1 1504 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 ITGB2P05107 769 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 SMTNP53814 917 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 GNASQ5JWF2 1037 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 CFHR5Q9BXR6 569 aa6.24□□□□□ -1.41
LINC01416-201ENST00000563553 BNIP3LO60238 219 aa6.23□□□□□ -1.41
LINC01416-201ENST00000563553 BCRP11274 1271 aa6.23□□□□□ -1.41
LINC01416-201ENST00000563553 PLA2G4AP47712 749 aa6.23□□□□□ -1.41
LINC01416-201ENST00000563553 FOXR1Q6PIV2 292 aa6.23□□□□□ -1.41
LINC01416-201ENST00000563553 TMEM151AQ8N4L1 468 aa6.23□□□□□ -1.41
LINC01416-201ENST00000563553 TRERF1Q96PN7 1200 aa6.23□□□□□ -1.41
LINC01416-201ENST00000563553 HOXB4P17483 251 aaPredicted RBP6.22□□□□□ -1.41
LINC01416-201ENST00000563553 ABHD17AQ96GS6 310 aa6.22□□□□□ -1.41
LINC01416-201ENST00000563553 CNTNAP5Q8WYK1 1306 aa6.22□□□□□ -1.41
LINC01416-201ENST00000563553 SHISA8B8ZZ34 492 aa6.22□□□□□ -1.41
LINC01416-201ENST00000563553 RNF225M0QZC1 329 aaPredicted RBP6.22□□□□□ -1.41
LINC01416-201ENST00000563553 EPHA4P54764 986 aa6.22□□□□□ -1.41
LINC01416-201ENST00000563553 LBRQ14739 615 aaKnown RBP6.22□□□□□ -1.41
LINC01416-201ENST00000563553 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
LINC01416-201ENST00000563553 SERTAD1Q9UHV2 236 aa6.22□□□□□ -1.41
LINC01416-201ENST00000563553 OIP5O43482 229 aa6.21□□□□□ -1.41
LINC01416-201ENST00000563553 NCOA4Q13772 614 aa6.21□□□□□ -1.41
LINC01416-201ENST00000563553 KLRG1Q96E93 195 aa6.21□□□□□ -1.41
LINC01416-201ENST00000563553 LRRC4BQ9NT99 713 aa6.21□□□□□ -1.41
LINC01416-201ENST00000563553 MAP3K10Q02779 954 aa6.21□□□□□ -1.42
LINC01416-201ENST00000563553 NFATC2IPQ8NCF5 419 aa6.21□□□□□ -1.42
LINC01416-201ENST00000563553 KIAA1024Q9UPX6 916 aa6.21□□□□□ -1.42
LINC01416-201ENST00000563553 A6NJY4 79 aa6.2□□□□□ -1.42
LINC01416-201ENST00000563553 SKIP12755 728 aa6.2□□□□□ -1.42
LINC01416-201ENST00000563553 CTBSQ01459 385 aa6.2□□□□□ -1.42
LINC01416-201ENST00000563553 SUZ12Q15022 739 aaKnown RBP6.2□□□□□ -1.42
LINC01416-201ENST00000563553 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
LINC01416-201ENST00000563553 OXCT2Q9BYC2 517 aaPredicted RBP6.2□□□□□ -1.42
LINC01416-201ENST00000563553 USP17L5A8MUK1 530 aa6.2□□□□□ -1.42
LINC01416-201ENST00000563553 SNRPNP63162 240 aaKnown RBP6.2□□□□□ -1.42
LINC01416-201ENST00000563553 ZDHHC1Q8WTX9 485 aa6.2□□□□□ -1.42
LINC01416-201ENST00000563553 ATXN7L1Q9ULK2 861 aaPredicted RBP6.2□□□□□ -1.42
LINC01416-201ENST00000563553 DNMT3AQ9Y6K1 912 aaPredicted RBP6.2□□□□□ -1.42
LINC01416-201ENST00000563553 MARSP56192 900 aaKnown RBP6.19□□□□□ -1.42
LINC01416-201ENST00000563553 GTF2IP78347 998 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 FOXK2Q01167 660 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 TBC1D9Q6ZT07 1266 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 SCARF2Q96GP6 870 aaPredicted RBP6.19□□□□□ -1.42
LINC01416-201ENST00000563553 ZNF358Q9NW07 568 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 CDK2AP1O14519 115 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 KANK3Q6NY19 840 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC01416-201ENST00000563553 C7orf43Q8WVR3 580 aa6.19□□□□□ -1.42
LINC01416-201ENST00000563553 NIFKQ9BYG3 293 aaKnown RBP6.19□□□□□ -1.42
LINC01416-201ENST00000563553 ZCCHC2Q9C0B9 1178 aaKnown RBP6.19□□□□□ -1.42
LINC01416-201ENST00000563553 FGFR3P22607 806 aa6.18□□□□□ -1.42
LINC01416-201ENST00000563553 MAP2K3P46734 347 aa6.18□□□□□ -1.42
LINC01416-201ENST00000563553 EML3Q32P44 896 aa6.18□□□□□ -1.42
LINC01416-201ENST00000563553 FNBP4Q8N3X1 1017 aaPredicted RBP6.18□□□□□ -1.42
LINC01416-201ENST00000563553 SCHIP1Q9P0W5 487 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms