RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 TRIM37O94972 964 aa11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 DISP2A7MBM2 1401 aa11.78□□□□□ -0.52
CTDSPL2-208ENST00000559793 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
CTDSPL2-208ENST00000559793 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
CTDSPL2-208ENST00000559793 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
CTDSPL2-208ENST00000559793 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL2-208ENST00000559793 APBA3O96018 575 aa11.77□□□□□ -0.53
CTDSPL2-208ENST00000559793 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.53
CTDSPL2-208ENST00000559793 CDK19Q9BWU1 502 aa11.77□□□□□ -0.53
CTDSPL2-208ENST00000559793 USP35Q9P2H5 1018 aa11.77□□□□□ -0.53
CTDSPL2-208ENST00000559793 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
CTDSPL2-208ENST00000559793 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
CTDSPL2-208ENST00000559793 EVA1CP58658 441 aa11.76□□□□□ -0.53
CTDSPL2-208ENST00000559793 PRSS12P56730 875 aa11.75□□□□□ -0.53
CTDSPL2-208ENST00000559793 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
CTDSPL2-208ENST00000559793 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
CTDSPL2-208ENST00000559793 CDCA7LQ96GN5 454 aa11.75□□□□□ -0.53
CTDSPL2-208ENST00000559793 ACEP12821 1306 aa11.75□□□□□ -0.53
CTDSPL2-208ENST00000559793 ATP7BP35670 1465 aa11.75□□□□□ -0.53
CTDSPL2-208ENST00000559793 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 PHRF1Q9P1Y6 1649 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 ARHGEF28Q8N1W1 1705 aaKnown RBP11.74□□□□□ -0.53
CTDSPL2-208ENST00000559793 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL2-208ENST00000559793 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
CTDSPL2-208ENST00000559793 CAMTA1Q9Y6Y1 1673 aa11.73□□□□□ -0.53
CTDSPL2-208ENST00000559793 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
CTDSPL2-208ENST00000559793 PTGDRQ13258 359 aa11.72□□□□□ -0.53
CTDSPL2-208ENST00000559793 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
CTDSPL2-208ENST00000559793 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-208ENST00000559793 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
CTDSPL2-208ENST00000559793 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-208ENST00000559793 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.53
CTDSPL2-208ENST00000559793 GCP02774 474 aa11.71□□□□□ -0.53
CTDSPL2-208ENST00000559793 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
CTDSPL2-208ENST00000559793 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
CTDSPL2-208ENST00000559793 NBPF14Q5TI25 921 aa11.7□□□□□ -0.54
CTDSPL2-208ENST00000559793 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
CTDSPL2-208ENST00000559793 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
CTDSPL2-208ENST00000559793 CPDO75976 1380 aa11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 RREB1Q92766 1687 aa11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 USP19O94966 1318 aa11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
CTDSPL2-208ENST00000559793 TOPAZ1Q8N9V7 1692 aa11.68□□□□□ -0.54
CTDSPL2-208ENST00000559793 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
CTDSPL2-208ENST00000559793 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
CTDSPL2-208ENST00000559793 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL2-208ENST00000559793 FCHSD2O94868 740 aa11.67□□□□□ -0.54
CTDSPL2-208ENST00000559793 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
CTDSPL2-208ENST00000559793 LAPTM4BQ86VI4 370 aa11.67□□□□□ -0.54
CTDSPL2-208ENST00000559793 KCNQ2O43526 872 aa11.66□□□□□ -0.54
CTDSPL2-208ENST00000559793 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
CTDSPL2-208ENST00000559793 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
CTDSPL2-208ENST00000559793 COL5A2P05997 1499 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 PLSCR1O15162 318 aa11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 YY1P25490 414 aa11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 CABP1Q9NZU7 370 aa11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 PARP4Q9UKK3 1724 aaKnown RBP11.65□□□□□ -0.54
CTDSPL2-208ENST00000559793 SBF2Q86WG5 1849 aa11.65□□□□□ -0.55
CTDSPL2-208ENST00000559793 KIAA1210Q9ULL0 1709 aa11.64□□□□□ -0.55
CTDSPL2-208ENST00000559793 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
CTDSPL2-208ENST00000559793 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL2-208ENST00000559793 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
CTDSPL2-208ENST00000559793 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL2-208ENST00000559793 CRB1P82279 1406 aa11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 GOLGA8CPA6NN73 597 aa11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 GPR37O15354 613 aa11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 TATDN2Q93075 761 aa11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 PPP1R1BQ9UD71 204 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
CTDSPL2-208ENST00000559793 CENPJQ9HC77 1338 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 DDB1Q16531 1140 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 TOM1L2Q6ZVM7 507 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 GPIHBP1Q8IV16 184 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 KCTD12Q96CX2 325 aaKnown RBP11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 BRD4O60885 1362 aaPredicted RBP11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 AATKQ6ZMQ8 1374 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 COL18A1P39060 1754 aa11.62□□□□□ -0.55
CTDSPL2-208ENST00000559793 SMAPO00193 183 aa11.61□□□□□ -0.55
CTDSPL2-208ENST00000559793 HIC1Q14526 733 aa11.61□□□□□ -0.55
CTDSPL2-208ENST00000559793 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
CTDSPL2-208ENST00000559793 OVOS2A0A0G2JMS6 1433 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms