RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 APLP1P51693 650 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 NBPF8Q3BBV2 869 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 MTRQ99707 1265 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 SPON1Q9HCB6 807 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 PPP1R1BQ9UD71 204 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-236ENST00000556220 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
ATXN3-236ENST00000556220 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
ATXN3-236ENST00000556220 KCNQ2O43526 872 aa10.38□□□□□ -0.75
ATXN3-236ENST00000556220 TMEM132EQ6IEE7 984 aa10.38□□□□□ -0.75
ATXN3-236ENST00000556220 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
ATXN3-236ENST00000556220 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
ATXN3-236ENST00000556220 TECPR2O15040 1411 aa10.38□□□□□ -0.75
ATXN3-236ENST00000556220 ADGRF5Q8IZF2 1346 aa10.37□□□□□ -0.75
ATXN3-236ENST00000556220 FCHSD2O94868 740 aa10.37□□□□□ -0.75
ATXN3-236ENST00000556220 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-236ENST00000556220 NWD2Q9ULI1 1742 aa10.36□□□□□ -0.75
ATXN3-236ENST00000556220 DNAJB2P25686 324 aa10.36□□□□□ -0.75
ATXN3-236ENST00000556220 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
ATXN3-236ENST00000556220 NINLQ9Y2I6 1382 aa10.36□□□□□ -0.75
ATXN3-236ENST00000556220 PRR14Q9BWN1 585 aa10.35□□□□□ -0.75
ATXN3-236ENST00000556220 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
ATXN3-236ENST00000556220 SMYD5Q6GMV2 418 aa10.34□□□□□ -0.75
ATXN3-236ENST00000556220 PMFBP1Q8TBY8 1022 aa10.34□□□□□ -0.75
ATXN3-236ENST00000556220 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
ATXN3-236ENST00000556220 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
ATXN3-236ENST00000556220 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-236ENST00000556220 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
ATXN3-236ENST00000556220 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
ATXN3-236ENST00000556220 KIF1AQ12756 1690 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 C1QTNF8P60827 252 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 ZNF516Q92618 1163 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 PRDM11Q9NQV5 511 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 KIF1BO60333 1816 aa10.32□□□□□ -0.76
ATXN3-236ENST00000556220 YTHDC2Q9H6S0 1430 aaKnown RBP10.31□□□□□ -0.76
ATXN3-236ENST00000556220 RRBP1Q9P2E9 1410 aaKnown RBP10.31□□□□□ -0.76
ATXN3-236ENST00000556220 ANKRD30BQ9BXX2 1392 aa10.3□□□□□ -0.76
ATXN3-236ENST00000556220 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
ATXN3-236ENST00000556220 HIC1Q14526 733 aa10.3□□□□□ -0.76
ATXN3-236ENST00000556220 PPP1R18Q6NYC8 613 aa10.3□□□□□ -0.76
ATXN3-236ENST00000556220 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
ATXN3-236ENST00000556220 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
ATXN3-236ENST00000556220 GPRASP1Q5JY77 1395 aa10.29□□□□□ -0.76
ATXN3-236ENST00000556220 OATP04181 439 aa10.29□□□□□ -0.76
ATXN3-236ENST00000556220 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATXN3-236ENST00000556220 C14orf93Q9H972 538 aaKnown RBP10.29□□□□□ -0.76
ATXN3-236ENST00000556220 FMN2Q9NZ56 1722 aa10.29□□□□□ -0.76
ATXN3-236ENST00000556220 TNS1Q9HBL0 1735 aaKnown RBP10.28□□□□□ -0.76
ATXN3-236ENST00000556220 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
ATXN3-236ENST00000556220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.28□□□□□ -0.76
ATXN3-236ENST00000556220 COPS2P61201 443 aa10.28□□□□□ -0.76
ATXN3-236ENST00000556220 CHRNA2Q15822 529 aa10.28□□□□□ -0.76
ATXN3-236ENST00000556220 PRAM1Q96QH2 718 aa10.28□□□□□ -0.76
ATXN3-236ENST00000556220 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.28□□□□□ -0.76
ATXN3-236ENST00000556220 USP35Q9P2H5 1018 aa10.28□□□□□ -0.76
ATXN3-236ENST00000556220 ACIN1Q9UKV3 1341 aaKnown RBP10.28□□□□□ -0.76
ATXN3-236ENST00000556220 THSD7AQ9UPZ6 1657 aa10.28□□□□□ -0.76
ATXN3-236ENST00000556220 NRAPQ86VF7 1730 aa10.27□□□□□ -0.76
ATXN3-236ENST00000556220 ZPR1O75312 459 aa10.27□□□□□ -0.77
ATXN3-236ENST00000556220 EVA1CP58658 441 aa10.27□□□□□ -0.77
ATXN3-236ENST00000556220 FAM161AQ3B820 660 aa10.27□□□□□ -0.77
ATXN3-236ENST00000556220 RBM26Q5T8P6 1007 aaKnown RBP10.27□□□□□ -0.77
ATXN3-236ENST00000556220 PCDHB3Q9Y5E6 796 aa10.27□□□□□ -0.77
ATXN3-236ENST00000556220 DHX57Q6P158 1386 aaKnown RBP10.26□□□□□ -0.77
ATXN3-236ENST00000556220 KIAA0232Q92628 1395 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 COL14A1Q05707 1796 aaKnown RBP10.26□□□□□ -0.77
ATXN3-236ENST00000556220 ANKARQ7Z5J8 1434 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-236ENST00000556220 PLSCR1O15162 318 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 GGCXP38435 758 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 POGKQ9P215 609 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 PPLO60437 1756 aa10.26□□□□□ -0.77
ATXN3-236ENST00000556220 PIK3C2GO75747 1445 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 ZBTB7AO95365 584 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
ATXN3-236ENST00000556220 LAPTM4AQ15012 233 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 KMT5BQ4FZB7 885 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 CFAP70Q5T0N1 1121 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
ATXN3-236ENST00000556220 PXYLP1Q8TE99 480 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 SYT17Q9BSW7 474 aa10.25□□□□□ -0.77
ATXN3-236ENST00000556220 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-236ENST00000556220 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
ATXN3-236ENST00000556220 LARP1Q6PKG0 1096 aaKnown RBP10.24□□□□□ -0.77
ATXN3-236ENST00000556220 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
ATXN3-236ENST00000556220 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
ATXN3-236ENST00000556220 PDGFDQ9GZP0 370 aaPredicted RBP10.24□□□□□ -0.77
ATXN3-236ENST00000556220 THRAP3Q9Y2W1 955 aaKnown RBP10.24□□□□□ -0.77
ATXN3-236ENST00000556220 ABCA3Q99758 1704 aa10.24□□□□□ -0.77
ATXN3-236ENST00000556220 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
ATXN3-236ENST00000556220 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-236ENST00000556220 PRR36Q9H6K5 1346 aa10.23□□□□□ -0.77
ATXN3-236ENST00000556220 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms